myRT

myRT report for GCA_009599905.1_ASM959990v1

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Seq: WIRU01000107.1 Sinorhizobium medicae strain KH36c contig_111, whole genome shotgun sequence (22935 bp)
Overview 1 RT 1: 17614-22253 bp Neighborhood of RT #1 [17614, 22288] ParD_like COG4185 RVT-GII IS285 Feature: gene Location: 17614-18210 bp Feature: domain Description: ParD_like Location: 17863-18037 bp Feature: domain Description: ParD_like Location: 1 7863-1 8037 bp Feature: gene Location: 18207-18797 bp Feature: domain Description: COG4185 Location: 18216-18759 bp Feature: domain Description: COG41 85 Location: 1 821 6-1 8759 bp Feature: gene Location: 19178-21001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19916-20606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 991 6-20606 bp Feature: gene Location: 21158-21367 bp Feature: gene Location: 21479-22288 bp Feature: domain Description: IS285 Location: 21485-22253 bp Feature: domain Description: IS285 Location: 21 485-22253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParD_like (pfam11903), COG4185 (Predicted ABC-type ATPase ), RVT-GII, IS285 (COG3328)

Seq: WIRU01000150.1 Sinorhizobium medicae strain KH36c contig_154, whole genome shotgun sequence (3855 bp)
Overview 1 RT 1: 951-3853 bp Neighborhood of RT #1 [951, 3852] COG3436 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 951-1712 bp Feature: domain Description: COG3436 Location: 1200-1677 bp Feature: domain Description: COG3436 Location: 12 00-1677 bp Feature: gene Location: 1772-2680 bp Feature: gene Location: 2225-3484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441-3095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 441-3095 bp Feature: domain Description: GIIM Note: maturase Location: 3176-3392 bp Feature: domain Description: GIIM Note: maturase Location: 3176-3392 bp Feature: gene Location: 3538-3852 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3568-3853 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3568-3853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), COG3436 (Transposase )