myRT

myRT report for GCA_009600165.1_ASM960016v1

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Seq: WIWK01000179.1 Pseudomonas sp. FSL R10-0399 NODE_179_length_7352_cov_89.762337, whole genome shotgun sequence (7352 bp)
Overview 1 RT 1: 1-1604 bp Neighborhood of RT #1 [1, 1604] RVT-Retrons HTH_XRE Feature: gene Location: 1-897 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 208-733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 208-733 bp Feature: gene Location: 869-1180 bp Feature: domain Description: HTH_XRE Location: 884-1043 bp Feature: domain Description: HTH_XRE Location: 884-1 043 bp Feature: gene Location: 1221-1604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)

Seq: WIWK01000236.1 Pseudomonas sp. FSL R10-0399 NODE_236_length_1881_cov_151.504435, whole genome shotgun sequence (1881 bp)
Overview 1 RT 1: 427-1654 bp Neighborhood of RT #1 [427, 1794] RVT-GII GIIM Feature: gene Location: 427-1794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1372 bp Feature: domain Description: GIIM Note: maturase Location: 1432-1654 bp Feature: domain Description: GIIM Note: maturase Location: 1432 -1654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIWK01000351.1 Pseudomonas sp. FSL R10-0399 NODE_352_length_247_cov_1.229412, whole genome shotgun sequence (247 bp)
Overview 1 RT 1: 1-247 bp Neighborhood of RT #1 [1, 246] RVT-GII Feature: gene Location: 1-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WIWK01000035.1 Pseudomonas sp. FSL R10-0399 NODE_35_length_48728_cov_74.158085, whole genome shotgun sequence (48728 bp)
Overview 1 RT 1: 20386-23550 bp Neighborhood of RT #1 [20386, 23570] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 20386-20691 bp Feature: gene Location: 20707-20919 bp Feature: gene Location: 21169-22329 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21421-22105 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214 21-22105 bp Feature: gene Location: 22542-22898 bp Feature: domain Description: Avd_like Location: 22569-22875 bp Feature: domain Description: Avd_like Location: 22569-22875 bp Feature: gene Location: 22953-23570 bp Feature: domain Description: DUF1566 Location: 23187-23550 bp Feature: domain Description: DUF1566 Location: 23187-23550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)