myRT

myRT report for GCA_009600585.1_ASM960058v1

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Seq: WBVV01000002.1 Klebsiella pneumoniae subsp. pneumoniae strain YmcD1 scf7180000000012, whole genome shotgun sequence (5347875 bp)
Overview 1 RT 1: 1294904-1297182 bp 2 RT 2: 3803575-3809199 bp 3 RT 3: 4150229-4154337 bp 4 RT 4: 4317628-4328296 bp Neighborhood of RT #1 [1294904, 1297214] RVT-GII hdeB Neighborhood of RT #2 [3803575, 3809199] dam Phage_GPA RVT-GII Neighborhood of RT #3 [4150229, 4154339] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [4317628, 4328298] SGNH_hydrolase_like_2 PinE RVT-GII PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 1294904-1296391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295309-1295999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 295309-1 295999 bp Feature: gene Location: 1296508-1296780 bp Feature: gene Location: 1296849-1297214 bp Feature: domain Description: hdeB Location: 1296915-1297182 bp Feature: domain Description: hdeB Location: 1 29691 5-1 2971 82 bp Feature: gene Location: 3803575-3804390 bp Feature: domain Description: dam Location: 3803578-3804313 bp Feature: domain Description: dam Location: 3803578-380431 3 bp Feature: gene Location: 3804387-3806771 bp Feature: domain Description: Phage_GPA Location: 3804951-3805917 bp Feature: domain Description: Phage_GPA Location: 3804951 -380591 7 bp Feature: gene Location: 3807233-3808720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807638-3808328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3807638-3808328 bp Feature: gene Location: 3808796-3808981 bp Feature: gene Location: 3809056-3809199 bp Feature: gene Location: 4150229-4150471 bp Feature: domain Description: DinI Location: 4150280-4150460 bp Feature: domain Description: DinI Location: 41 50280-41 50460 bp Feature: gene Location: 4150486-4150632 bp Feature: gene Location: 4151086-4152573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4151491-4152181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 51 491 -41 521 81 bp Feature: gene Location: 4152652-4153071 bp Feature: domain Description: PRK10276 Location: 4152655-4153066 bp Feature: domain Description: PRK1 0276 Location: 41 52655-41 53066 bp Feature: gene Location: 4153074-4154339 bp Feature: domain Description: umuC Location: 4153077-4154337 bp Feature: domain Description: umuC Location: 41 53077-41 54337 bp Feature: gene Location: 4317628-4319391 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 4318963-4319374 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 431 8963-431 9374 bp Feature: gene Location: 4319484-4320032 bp Feature: domain Description: PinE Location: 4319487-4320024 bp Feature: domain Description: PinE Location: 431 9487-4320024 bp Feature: gene Location: 4321425-4322912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4321830-4322520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4321 830-4322520 bp Feature: gene Location: 4322992-4323411 bp Feature: domain Description: PRK10276 Location: 4322995-4323406 bp Feature: domain Description: PRK1 0276 Location: 4322995-4323406 bp Feature: gene Location: 4323413-4324678 bp Feature: domain Description: umuC Location: 4323416-4324676 bp Feature: domain Description: umuC Location: 432341 6-4324676 bp Feature: gene Location: 4324903-4325091 bp Feature: gene Location: 4325351-4326259 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4325624-4326080 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4325624-4326080 bp Feature: gene Location: 4326460-4327128 bp Feature: domain Description: PRK09951 Location: 4326463-4327126 bp Feature: domain Description: PRK09951 Location: 4326463-43271 26 bp Feature: gene Location: 4327333-4328298 bp Feature: domain Description: PRK15110 Location: 4327336-4328296 bp Feature: domain Description: PRK1 51 1 0 Location: 4327336-4328296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, hdeB (PRK11566), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), SGNH_hydrolase_like_2 (cd01834), PinE (COG1961), RVT-UG11
PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: WBVV01000003.1 Klebsiella pneumoniae subsp. pneumoniae strain YmcD1 scf7180000000014, whole genome shotgun sequence (239608 bp)
Overview 1 RT 1: 207514-210630 bp Neighborhood of RT #1 [207514, 210630] PRK10276 RVT-GII Feature: gene Location: 207514-207939 bp Feature: domain Description: PRK10276 Location: 207517-207925 bp Feature: domain Description: PRK102 76 Location: 2 07517-2 0792 5 bp Feature: gene Location: 208133-208345 bp Feature: gene Location: 208420-209829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208747-209437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 08747-2 09437 bp Feature: gene Location: 209745-210293 bp Feature: gene Location: 210352-210630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII