myRT

myRT report for GCA_009601185.1_ASM960118v1

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Seq: WISL01000100.1 Sinorhizobium meliloti strain M243 contig_100, whole genome shotgun sequence (12956 bp)
Overview 1 RT 1: 11271-12791 bp Neighborhood of RT #1 [11271, 12877] RVT-GII GIIM Feature: gene Location: 11271-11402 bp Feature: gene Location: 11339-11557 bp Feature: gene Location: 11618-12877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11834-12485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 834-1 2485 bp Feature: domain Description: GIIM Note: maturase Location: 12569-12791 bp Feature: domain Description: GIIM Note: maturase Location: 1 2569-1 2791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISL01000102.1 Sinorhizobium meliloti strain M243 contig_102, whole genome shotgun sequence (21773 bp)
Overview 1 RT 1: 16799-21742 bp Neighborhood of RT #1 [16799, 21771] PRK06939 PRiA4_ORF3 PBP1_ABC_LIVBP_like RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 16799-17983 bp Feature: domain Description: PRK06939 Location: 16802-17978 bp Feature: domain Description: PRK06939 Location: 16802 -17978 bp Feature: gene Location: 17999-19144 bp Feature: domain Description: PRiA4_ORF3 Location: 18017-18515 bp Feature: domain Description: PRiA4_ORF3 Location: 18017-18515 bp Feature: domain Description: PBP1_ABC_LIVBP_like Location: 18689-19040 bp Feature: domain Description: PBP1_ABC_LIVBP_like Location: 18689-19040 bp Feature: gene Location: 19286-21109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20024-20714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 002 4-2 0714 bp Feature: gene Location: 21211-21771 bp Feature: domain Description: DDE_Tnp_IS66 Location: 21217-21610 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 12 17-2 1610 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21631-21742 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 1631-2 1742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06939 (2-amino-3-ketobutyrate coenzyme A ligase; Provisional), PRiA4_ORF3 (pfam07929), PBP1_ABC_LIVBP_like, RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: WISL01000126.1 Sinorhizobium meliloti strain M243 contig_126, whole genome shotgun sequence (156400 bp)
Overview 1 RT 1: 154150-156398 bp Neighborhood of RT #1 [154150, 156397] HTH_ARSR AraJ RVT-GII Feature: gene Location: 154150-154521 bp Feature: domain Description: HTH_ARSR Location: 154207-154405 bp Feature: domain Description: HTH_ARSR Location: 154207-154405 bp Feature: gene Location: 154611-155795 bp Feature: domain Description: AraJ Location: 154614-155772 bp Feature: domain Description: AraJ Location: 154614-155772 bp Feature: gene Location: 155972-156397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156299-156398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156299-1563 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WISL01000131.1 Sinorhizobium meliloti strain M243 contig_131, whole genome shotgun sequence (6887 bp)
Overview 1 RT 1: 2-4333 bp Neighborhood of RT #1 [2, 4344] RVT-GII RVT-GII GIIM PRK09356 hutH Feature: gene Location: 2-580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-551 bp Feature: gene Location: 655-1362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 658-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 658-94 3 bp Feature: domain Description: GIIM Note: maturase Location: 997-1213 bp Feature: domain Description: GIIM Note: maturase Location: 997-1213 bp Feature: gene Location: 1442-2812 bp Feature: domain Description: PRK09356 Location: 1601-2804 bp Feature: domain Description: PRK09356 Location: 1601-2804 bp Feature: gene Location: 2809-4344 bp Feature: domain Description: hutH Location: 2818-4333 bp Feature: domain Description: hutH Location: 2818-4 333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388), hutH (TIGR01225)

Seq: WISL01000132.1 Sinorhizobium meliloti strain M243 contig_132, whole genome shotgun sequence (64669 bp)
Overview 1 RT 1: 1-1795 bp Neighborhood of RT #1 [1, 1815] RVT-GII DUF982 Feature: gene Location: 1-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: gene Location: 1209-1511 bp Feature: gene Location: 1555-1815 bp Feature: domain Description: DUF982 Location: 1588-1795 bp Feature: domain Description: DUF982 Location: 15 88-1795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF982 (pfam06169)

Seq: WISL01000014.1 Sinorhizobium meliloti strain M243 contig_14, whole genome shotgun sequence (3531 bp)
Overview 1 RT 1: 211-3399 bp Neighborhood of RT #1 [211, 3404] RVT-GII GIIM IS5 IS5 Feature: gene Location: 211-342 bp Feature: gene Location: 279-497 bp Feature: gene Location: 558-1817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1425 bp Feature: domain Description: GIIM Note: maturase Location: 1509-1731 bp Feature: domain Description: GIIM Note: maturase Location: 1509-1731 bp Feature: gene Location: 2070-3404 bp Feature: domain Description: IS5 Location: 2073-2808 bp Feature: domain Description: IS5 Location: 2073-2808 bp Feature: domain Description: IS5 Location: 2895-3399 bp Feature: domain Description: IS5 Location: 2895-3399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: WISL01000015.1 Sinorhizobium meliloti strain M243 contig_15, whole genome shotgun sequence (51876 bp)
Overview 1 RT 1: 80-2476 bp Neighborhood of RT #1 [80, 2520] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 80-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-947 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1253 bp Feature: gene Location: 1555-1686 bp Feature: gene Location: 2044-2520 bp Feature: domain Description: DDE_Tnp_1 Location: 2365-2476 bp Feature: domain Description: DDE_Tnp_1 Location: 2365-247 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: WISL01000046.1 Sinorhizobium meliloti strain M243 contig_46, whole genome shotgun sequence (2780 bp)
Overview 1 RT 1: 20-2764 bp Neighborhood of RT #1 [20, 2778] COG3415 RVT-GII GIIM DDE_3 Feature: gene Location: 20-427 bp Feature: domain Description: COG3415 Location: 23-425 bp Feature: domain Description: COG3415 Location: 23-425 bp Feature: gene Location: 1022-2281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238-1892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238 -18 92 bp Feature: domain Description: GIIM Note: maturase Location: 1973-2195 bp Feature: domain Description: GIIM Note: maturase Location: 1973-2195 bp Feature: gene Location: 2377-2778 bp Feature: domain Description: DDE_3 Location: 2392-2764 bp Feature: domain Description: DDE_3 Location: 2392-2764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3415 (Transposase ), DDE_3 (pfam13358)

Seq: WISL01000056.1 Sinorhizobium meliloti strain M243 contig_56, whole genome shotgun sequence (153797 bp)
Overview 1 RT 1: 151337-153646 bp Neighborhood of RT #1 [151337, 153795] fabG DUF3018 RVT-GII GIIM Feature: gene Location: 151337-152119 bp Feature: domain Description: fabG Location: 151355-152105 bp Feature: domain Description: fabG Location: 151355-152105 bp Feature: gene Location: 152302-152442 bp Feature: domain Description: DUF3018 Location: 152308-152431 bp Feature: domain Description: DUF3018 Location: 152308-152431 bp Feature: gene Location: 152941-153795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152980-153376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1529 80-153376 bp Feature: domain Description: GIIM Note: maturase Location: 153430-153646 bp Feature: domain Description: GIIM Note: maturase Location: 153430-153646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fabG (PRK12825), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)

Seq: WISL01000071.1 Sinorhizobium meliloti strain M243 contig_71, whole genome shotgun sequence (6887 bp)
Overview 1 RT 1: 2544-6857 bp Neighborhood of RT #1 [2544, 6886] hutH PRK09356 RVT-GII GIIM RVT-GII Feature: gene Location: 2544-4079 bp Feature: domain Description: hutH Location: 2553-4068 bp Feature: domain Description: hutH Location: 2553-4068 bp Feature: gene Location: 4076-5446 bp Feature: domain Description: PRK09356 Location: 4235-5438 bp Feature: domain Description: PRK09356 Location: 4235-5438 bp Feature: gene Location: 5526-6233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5529-5814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5529-5814 bp Feature: domain Description: GIIM Note: maturase Location: 5868-6084 bp Feature: domain Description: GIIM Note: maturase Location: 5868-6084 bp Feature: gene Location: 6308-6886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6635-6857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6635-6857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: WISL01000073.1 Sinorhizobium meliloti strain M243 contig_73, whole genome shotgun sequence (18085 bp)
Overview 1 RT 1: 16021-17920 bp Neighborhood of RT #1 [16021, 18006] RVT-GII GIIM Feature: gene Location: 16021-16236 bp Feature: gene Location: 16400-16531 bp Feature: gene Location: 16747-18006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16963-17614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16963-17614 bp Feature: domain Description: GIIM Note: maturase Location: 17698-17920 bp Feature: domain Description: GIIM Note: maturase Location: 17698-17920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISL01000098.1 Sinorhizobium meliloti strain M243 contig_98, whole genome shotgun sequence (7868 bp)
Overview 1 RT 1: 6183-7703 bp Neighborhood of RT #1 [6183, 7789] RVT-GII GIIM Feature: gene Location: 6183-6314 bp Feature: gene Location: 6251-6469 bp Feature: gene Location: 6530-7789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6746-7397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6746-7397 bp Feature: domain Description: GIIM Note: maturase Location: 7481-7703 bp Feature: domain Description: GIIM Note: maturase Location: 7481-7703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)