myRT

myRT report for GCA_009601235.1_ASM960123v1

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Seq: WISS01000113.1 Sinorhizobium meliloti strain N6B7 contig_113, whole genome shotgun sequence (43556 bp)
Overview 1 RT 1: 56-3867 bp Neighborhood of RT #1 [56, 3875] IS285 RVT-GII GIIM INT_RitA_C_like INT_RitA_C_like Feature: gene Location: 56-481 bp Feature: gene Location: 471-626 bp Feature: domain Description: IS285 Location: 480-588 bp Feature: domain Description: IS285 Location: 480-588 bp Feature: gene Location: 1197-2714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1500-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 500-2262 bp Feature: domain Description: GIIM Note: maturase Location: 2331-2601 bp Feature: domain Description: GIIM Note: maturase Location: 2331 -2601 bp Feature: gene Location: 3325-3666 bp Feature: domain Description: INT_RitA_C_like Location: 3328-3649 bp Feature: domain Description: INT_RitA_C_like Location: 3328-3649 bp Feature: gene Location: 3663-3875 bp Feature: domain Description: INT_RitA_C_like Location: 3672-3867 bp Feature: domain Description: INT_RitA_C_like Location: 3672-3867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_RitA_C_like (cd01188), IS285 (COG3328)

Seq: WISS01000117.1 Sinorhizobium meliloti strain N6B7 contig_117, whole genome shotgun sequence (27316 bp)
Overview 1 RT 1: 25806-27314 bp Neighborhood of RT #1 [25806, 27313] RVT-GII Feature: gene Location: 25806-26108 bp Feature: gene Location: 26502-26657 bp Feature: gene Location: 26888-27313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27215-27314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 15-2 7314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISS01000128.1 Sinorhizobium meliloti strain N6B7 contig_128, whole genome shotgun sequence (23529 bp)
Overview 1 RT 1: 82-2884 bp Neighborhood of RT #1 [82, 2889] RVT-GII GIIM PRK12687 PRK12687 Feature: gene Location: 82-948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-940 bp Feature: gene Location: 1060-1443 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: gene Location: 1702-2889 bp Feature: domain Description: PRK12687 Location: 1705-2311 bp Feature: domain Description: PRK12687 Location: 1705-23 11 bp Feature: domain Description: PRK12687 Location: 2560-2884 bp Feature: domain Description: PRK12687 Location: 2560-2884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), PRK12687 (flagellin; Reviewed), RVT-GII

Seq: WISS01000129.1 Sinorhizobium meliloti strain N6B7 contig_129, whole genome shotgun sequence (23617 bp)
Overview 1 RT 1: 1-2062 bp Neighborhood of RT #1 [1, 2064] RVT-GII PRK12687 PRK12687 Feature: gene Location: 1-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-4 30 bp Feature: gene Location: 660-881 bp Feature: gene Location: 907-2064 bp Feature: domain Description: PRK12687 Location: 910-1477 bp Feature: domain Description: PRK12687 Location: 910-14 77 bp Feature: domain Description: PRK12687 Location: 1732-2062 bp Feature: domain Description: PRK12687 Location: 1732-2062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK12687 (flagellin; Reviewed)

Seq: WISS01000132.1 Sinorhizobium meliloti strain N6B7 contig_132, whole genome shotgun sequence (77333 bp)
Overview 1 RT 1: 74291-77208 bp Neighborhood of RT #1 [74291, 77252] fabG DUF3018 RVT-GII Feature: gene Location: 74291-75073 bp Feature: domain Description: fabG Location: 74309-75059 bp Feature: domain Description: fabG Location: 74309-75 05 9 bp Feature: gene Location: 75256-75396 bp Feature: domain Description: DUF3018 Location: 75262-75385 bp Feature: domain Description: DUF3018 Location: 75 262-75 385 bp Feature: gene Location: 76374-77252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76701-77208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76701-77208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fabG (PRK12825), DUF3018 (pfam11455), RVT-GII

Seq: WISS01000141.1 Sinorhizobium meliloti strain N6B7 contig_141, whole genome shotgun sequence (2295 bp)
Overview 1 RT 1: 3-1649 bp Neighborhood of RT #1 [3, 1735] DDE_3 RVT-GII GIIM Feature: gene Location: 3-380 bp Feature: domain Description: DDE_3 Location: 18-375 bp Feature: domain Description: DDE_3 Location: 18-375 bp Feature: gene Location: 476-1735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 92-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1427-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1427-16 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: WISS01000183.1 Sinorhizobium meliloti strain N6B7 contig_183, whole genome shotgun sequence (15856 bp)
Overview 1 RT 1: 13606-15854 bp Neighborhood of RT #1 [13606, 15853] HTH_ARSR AraJ RVT-GII Feature: gene Location: 13606-13977 bp Feature: domain Description: HTH_ARSR Location: 13663-13861 bp Feature: domain Description: HTH_ARSR Location: 13663-13861 bp Feature: gene Location: 14067-15251 bp Feature: domain Description: AraJ Location: 14070-15228 bp Feature: domain Description: AraJ Location: 1407 0-15228 bp Feature: gene Location: 15428-15853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15755-15854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157 55-15854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WISS01000204.1 Sinorhizobium meliloti strain N6B7 contig_204, whole genome shotgun sequence (7264 bp)
Overview 1 RT 1: 4401-6813 bp Neighborhood of RT #1 [4401, 7181] RVT-GII Feature: gene Location: 4401-4883 bp Feature: gene Location: 4925-5392 bp Feature: gene Location: 5874-7181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6126-6813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6126-68 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISS01000045.1 Sinorhizobium meliloti strain N6B7 contig_45, whole genome shotgun sequence (3192 bp)
Overview 1 RT 1: 223-3181 bp Neighborhood of RT #1 [223, 3189] RVT-GII PRK08299 Feature: gene Location: 223-411 bp Feature: gene Location: 417-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1458 bp Feature: gene Location: 1967-2296 bp Feature: gene Location: 2437-3189 bp Feature: domain Description: PRK08299 Location: 2440-3181 bp Feature: domain Description: PRK0829 9 Location: 2440-3181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08299 (NADP-dependent isocitrate dehydrogenase), RVT-GII

Seq: WISS01000073.1 Sinorhizobium meliloti strain N6B7 contig_73, whole genome shotgun sequence (3452 bp)
Overview 1 RT 1: 194-2566 bp Neighborhood of RT #1 [194, 2934] PRK07574 RVT-GII Feature: gene Location: 194-1399 bp Feature: domain Description: PRK07574 Location: 203-1352 bp Feature: domain Description: PRK07574 Location: 203-1352 bp Feature: gene Location: 1627-2934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1879-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1879-2566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK07574 (NAD-dependent formate dehydrogenase)

Seq: WISS01000093.1 Sinorhizobium meliloti strain N6B7 contig_93, whole genome shotgun sequence (6387 bp)
Overview 1 RT 1: 3989-5936 bp Neighborhood of RT #1 [3989, 6304] Transposase_mut RVT-GII Feature: gene Location: 3989-4435 bp Feature: domain Description: Transposase_mut Location: 3992-4349 bp Feature: domain Description: Transposase_mut Location: 3992-4349 bp Feature: gene Location: 4701-4889 bp Feature: gene Location: 4895-6304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5249-5936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5249-5936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII