myRT

myRT report for GCA_009601255.1_ASM960125v1

Download annotations/find similar RTs

Seq: WISO01000100.1 Sinorhizobium meliloti strain M270 contig_100, whole genome shotgun sequence (8323 bp)
Overview 1 RT 1: 4928-7621 bp Neighborhood of RT #1 [4928, 7665] RVT-GII GIIM DDE_3 Feature: gene Location: 4928-5212 bp Feature: gene Location: 5453-5764 bp Feature: gene Location: 6102-6854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6120-6774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 20-6774 bp Feature: gene Location: 6860-7162 bp Feature: domain Description: GIIM Note: maturase Location: 6863-7073 bp Feature: domain Description: GIIM Note: maturase Location: 6863-7073 bp Feature: gene Location: 7216-7665 bp Feature: domain Description: DDE_3 Location: 7255-7621 bp Feature: domain Description: DDE_3 Location: 7255-7621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: WISO01000101.1 Sinorhizobium meliloti strain M270 contig_101, whole genome shotgun sequence (7908 bp)
Overview 1 RT 1: 4928-7528 bp Neighborhood of RT #1 [4928, 7533] RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 4928-5212 bp Feature: gene Location: 5453-5764 bp Feature: gene Location: 6102-6854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6120-6774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 612 0-6774 bp Feature: gene Location: 6860-7162 bp Feature: domain Description: GIIM Note: maturase Location: 6863-7073 bp Feature: domain Description: GIIM Note: maturase Location: 6863-7073 bp Feature: gene Location: 7216-7533 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7246-7528 bp Feature: domain Description: DDE_Tnp_IS66 Location: 72 46-752 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: WISO01000161.1 Sinorhizobium meliloti strain M270 contig_161, whole genome shotgun sequence (6485 bp)
Overview 1 RT 1: 2843-6479 bp Neighborhood of RT #1 [2843, 6484] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 2843-4378 bp Feature: domain Description: hutH Location: 2852-4367 bp Feature: domain Description: hutH Location: 2852-43 67 bp Feature: gene Location: 4375-5745 bp Feature: domain Description: PRK09356 Location: 4534-5737 bp Feature: domain Description: PRK093 56 Location: 453 4-573 7 bp Feature: gene Location: 6017-6484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6020-6257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6020-6257 bp Feature: domain Description: GIIM Note: maturase Location: 6311-6479 bp Feature: domain Description: GIIM Note: maturase Location: 63 11-6479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: WISO01000164.1 Sinorhizobium meliloti strain M270 contig_164, whole genome shotgun sequence (37509 bp)
Overview 1 RT 1: 2-1935 bp Neighborhood of RT #1 [2, 1935] BrkB RVT-GII Feature: gene Location: 2-205 bp Feature: gene Location: 303-1157 bp Feature: domain Description: BrkB Location: 390-1116 bp Feature: domain Description: BrkB Location: 390-1116 bp Feature: gene Location: 1248-1391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251-1344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1251-134 4 bp Feature: gene Location: 1410-1652 bp Feature: gene Location: 1759-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BrkB (COG1295), RVT-GII

Seq: WISO01000186.1 Sinorhizobium meliloti strain M270 contig_186, whole genome shotgun sequence (6490 bp)
Overview 1 RT 1: 110-3837 bp Neighborhood of RT #1 [110, 3902] TnpB_IS66 InsE RVT-GII group_II_RT_mat PBP2_Ehub_like Feature: gene Location: 110-364 bp Feature: domain Description: TnpB_IS66 Location: 113-326 bp Feature: domain Description: TnpB_IS66 Location: 113-326 bp Feature: gene Location: 444-902 bp Feature: domain Description: InsE Location: 489-660 bp Feature: domain Description: InsE Location: 489-660 bp Feature: gene Location: 1015-2358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1753-2347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175 3-2347 bp Feature: gene Location: 2508-2837 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2514-2703 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 25 14-2703 bp Feature: gene Location: 3012-3902 bp Feature: domain Description: PBP2_Ehub_like Location: 3114-3837 bp Feature: domain Description: PBP2_Ehub_like Location: 3114-3837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), InsE (COG2963), RVT-GII, group_II_RT_mat (TIGR04416), PBP2_Ehub_like (cd01002)

Seq: WISO01000187.1 Sinorhizobium meliloti strain M270 contig_187, whole genome shotgun sequence (6607 bp)
Overview 1 RT 1: 110-5775 bp Neighborhood of RT #1 [110, 5775] TnpB_IS66 InsE RVT-GII YkfC RVT-GII RVT-GII Transposase_mut Feature: gene Location: 110-463 bp Feature: domain Description: TnpB_IS66 Location: 137-425 bp Feature: domain Description: TnpB_IS6 6 Location: 137-425 bp Feature: gene Location: 444-902 bp Feature: domain Description: InsE Location: 489-660 bp Feature: domain Description: InsE Location: 489-6 6 0 bp Feature: gene Location: 1015-2358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1753-2347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1753-2347 bp Feature: gene Location: 2868-3053 bp Feature: gene Location: 3057-3917 bp Feature: domain Description: YkfC Location: 3060-3405 bp Feature: domain Description: YkfC Location: 306 0-3405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3609-3846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36 09-3846 bp Feature: gene Location: 3878-4369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908-4109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3908-4109 bp Feature: gene Location: 4693-5217 bp Feature: domain Description: Transposase_mut Location: 4699-5137 bp Feature: domain Description: Transposase_mut Location: 46 99-5137 bp Feature: gene Location: 5617-5775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), InsE (COG2963), RVT-GII, YkfC (COG3344), Transposase_mut (pfam00872)

Seq: WISO01000209.1 Sinorhizobium meliloti strain M270 contig_209, whole genome shotgun sequence (15586 bp)
Overview 1 RT 1: 3-2490 bp Neighborhood of RT #1 [3, 2495] RVT-GII RVT-GII group_II_RT_mat COG3335 Feature: gene Location: 3-170 bp Feature: gene Location: 700-1080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1060 bp Feature: gene Location: 1161-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164-1356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164-1356 bp Feature: gene Location: 1472-1954 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1475-1838 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 147 5-1838 bp Feature: gene Location: 2262-2495 bp Feature: domain Description: COG3335 Location: 2265-2490 bp Feature: domain Description: COG3335 Location: 2265-2490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), COG3335 (Transposase )

Seq: WISO01000229.1 Sinorhizobium meliloti strain M270 contig_229, whole genome shotgun sequence (91777 bp)
Overview 1 RT 1: 90477-91771 bp Neighborhood of RT #1 [90477, 91776] DUF3018 MazF RVT-GII GIIM Feature: gene Location: 90477-90617 bp Feature: domain Description: DUF3018 Location: 90480-90609 bp Feature: domain Description: DUF3018 Location: 9048 0-90609 bp Feature: gene Location: 90614-90817 bp Feature: domain Description: MazF Location: 90617-90728 bp Feature: domain Description: MazF Location: 90617-90728 bp Feature: gene Location: 91309-91776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91312-91549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91312-91549 bp Feature: domain Description: GIIM Note: maturase Location: 91603-91771 bp Feature: domain Description: GIIM Note: maturase Location: 91603-91771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3018 (pfam11455), MazF (COG2337), RVT-GII, GIIM (pfam08388)

Seq: WISO01000279.1 Sinorhizobium meliloti strain M270 contig_279, whole genome shotgun sequence (6144 bp)
Overview 1 RT 1: 3208-6138 bp Neighborhood of RT #1 [3208, 6143] HTH_ARSR HTH_ARSR RVT-GII GIIM Feature: gene Location: 3208-4878 bp Feature: domain Description: HTH_ARSR Location: 3643-3721 bp Feature: domain Description: HTH_ARSR Location: 3643-3721 bp Feature: domain Description: HTH_ARSR Location: 4120-4246 bp Feature: domain Description: HTH_ARSR Location: 4120-4246 bp Feature: gene Location: 4958-5269 bp Feature: gene Location: 5676-6143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5679-5916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5679 -59 16 bp Feature: domain Description: GIIM Note: maturase Location: 5970-6138 bp Feature: domain Description: GIIM Note: maturase Location: 59 70-6138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388)

Seq: WISO01000287.1 Sinorhizobium meliloti strain M270 contig_287, whole genome shotgun sequence (120930 bp)
Overview 1 RT 1: 2-2047 bp Neighborhood of RT #1 [2, 2061] RVT-GII GIIM COG3791 pseudoazurin Feature: gene Location: 2-469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-242 bp Feature: domain Description: GIIM Note: maturase Location: 296-464 bp Feature: domain Description: GIIM Note: maturase Location: 296-464 bp Feature: gene Location: 763-1167 bp Feature: domain Description: COG3791 Location: 766-1159 bp Feature: domain Description: COG3791 Location: 766-1159 bp Feature: gene Location: 1879-2061 bp Feature: domain Description: pseudoazurin Location: 1885-2047 bp Feature: domain Description: pseudoazurin Location: 1885-2047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3791 (Uncharacterized conserved protein ), pseudoazurin (TIGR02375)

Seq: WISO01000288.1 Sinorhizobium meliloti strain M270 contig_288, whole genome shotgun sequence (1256 bp)
Overview 1 RT 1: 257-1225 bp Neighborhood of RT #1 [257, 1254] RVT-GII GIIM RVT-GII Feature: gene Location: 257-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-545 bp Feature: domain Description: GIIM Note: maturase Location: 599-767 bp Feature: domain Description: GIIM Note: maturase Location: 599-767 bp Feature: gene Location: 847-1254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003-1225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISO01000311.1 Sinorhizobium meliloti strain M270 contig_311, whole genome shotgun sequence (4065 bp)
Overview 1 RT 1: 516-3094 bp Neighborhood of RT #1 [516, 3094] COG3547 COG3547 RVT-GII Feature: gene Location: 516-920 bp Feature: domain Description: COG3547 Location: 621-846 bp Feature: domain Description: COG3547 Location: 621-846 bp Feature: gene Location: 946-1683 bp Feature: domain Description: COG3547 Location: 949-1630 bp Feature: domain Description: COG3547 Location: 949-1630 bp Feature: gene Location: 1984-2529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2029-2455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2029-2455 bp Feature: gene Location: 2528-2899 bp Feature: gene Location: 2918-3094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII

Seq: WISO01000346.1 Sinorhizobium meliloti strain M270 contig_346, whole genome shotgun sequence (9434 bp)
Overview 1 RT 1: 549-2966 bp Neighborhood of RT #1 [549, 2966] RVT-GII Feature: gene Location: 549-1958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1590 bp Feature: gene Location: 2302-2577 bp Feature: gene Location: 2718-2966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISO01000347.1 Sinorhizobium meliloti strain M270 contig_347, whole genome shotgun sequence (33792 bp)
Overview 1 RT 1: 32808-33786 bp Neighborhood of RT #1 [32808, 33791] RVT-GII GIIM Feature: gene Location: 32808-32966 bp Feature: gene Location: 33018-33179 bp Feature: gene Location: 33324-33791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33327-33564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33327-33564 bp Feature: domain Description: GIIM Note: maturase Location: 33618-33786 bp Feature: domain Description: GIIM Note: maturase Location: 33618-33786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISO01000093.1 Sinorhizobium meliloti strain M270 contig_93, whole genome shotgun sequence (1047 bp)
Overview 1 RT 1: 3-786 bp Neighborhood of RT #1 [3, 791] RVT-GII GIIM Feature: gene Location: 3-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-564 bp Feature: domain Description: GIIM Note: maturase Location: 618-786 bp Feature: domain Description: GIIM Note: maturase Location: 618-786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)