myRT

myRT report for GCA_009601325.1_ASM960132v1

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Seq: WISC01000105.1 Sinorhizobium meliloti strain M10 contig_105, whole genome shotgun sequence (2832 bp)
Overview 1 RT 1: 96-2825 bp Neighborhood of RT #1 [96, 2830] COG3415 RVT-GII GIIM DDE_3 Feature: gene Location: 96-503 bp Feature: domain Description: COG3415 Location: 99-501 bp Feature: domain Description: COG341 5 Location: 99-501 bp Feature: gene Location: 1098-2357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1314-1968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 4-1 968 bp Feature: domain Description: GIIM Note: maturase Location: 2049-2271 bp Feature: domain Description: GIIM Note: maturase Location: 2049-2271 bp Feature: gene Location: 2453-2830 bp Feature: domain Description: DDE_3 Location: 2468-2825 bp Feature: domain Description: DDE_3 Location: 2468-2825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), COG3415 (Transposase )

Seq: WISC01000136.1 Sinorhizobium meliloti strain M10 contig_136, whole genome shotgun sequence (27320 bp)
Overview 1 RT 1: 25817-27318 bp Neighborhood of RT #1 [25817, 27317] RVT-GII Feature: gene Location: 25817-26119 bp Feature: gene Location: 26455-26694 bp Feature: gene Location: 27075-27317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27219-27318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 19-2 7318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISC01000172.1 Sinorhizobium meliloti strain M10 contig_172, whole genome shotgun sequence (153768 bp)
Overview 1 RT 1: 1-1451 bp Neighborhood of RT #1 [1, 1459] RVT-GII GIIM MazF DUF3018 Feature: gene Location: 1-819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-400 bp Feature: domain Description: GIIM Note: maturase Location: 454-670 bp Feature: domain Description: GIIM Note: maturase Location: 454-670 bp Feature: gene Location: 1119-1322 bp Feature: domain Description: MazF Location: 1122-1233 bp Feature: domain Description: MazF Location: 1122-123 3 bp Feature: gene Location: 1319-1459 bp Feature: domain Description: DUF3018 Location: 1322-1451 bp Feature: domain Description: DUF3 018 Location: 13 22-1451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazF (COG2337), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)

Seq: WISC01000208.1 Sinorhizobium meliloti strain M10 contig_208, whole genome shotgun sequence (92396 bp)
Overview 1 RT 1: 88601-92328 bp Neighborhood of RT #1 [88601, 92393] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 88601-90136 bp Feature: domain Description: hutH Location: 88610-90125 bp Feature: domain Description: hutH Location: 88610-90125 bp Feature: gene Location: 90133-91503 bp Feature: domain Description: PRK09356 Location: 90292-91495 bp Feature: domain Description: PRK09356 Location: 90292-914 95 bp Feature: gene Location: 91770-92393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91773-92166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91773-92166 bp Feature: domain Description: GIIM Note: maturase Location: 92220-92328 bp Feature: domain Description: GIIM Note: maturase Location: 92220-92328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: WISC01000030.1 Sinorhizobium meliloti strain M10 contig_30, whole genome shotgun sequence (1482 bp)
Overview 1 RT 1: 3-1477 bp Neighborhood of RT #1 [3, 1479] RVT-GII RVT-GII GIIM Feature: gene Location: 3-206 bp Feature: gene Location: 563-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-929 bp Feature: gene Location: 1033-1479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1321 bp Feature: domain Description: GIIM Note: maturase Location: 1375-1477 bp Feature: domain Description: GIIM Note: maturase Location: 1375 -1477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISC01000031.1 Sinorhizobium meliloti strain M10 contig_31, whole genome shotgun sequence (1486 bp)
Overview 1 RT 1: 3-1481 bp Neighborhood of RT #1 [3, 1483] RVT-GII GIIM Feature: gene Location: 3-182 bp Feature: gene Location: 563-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1325 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1481 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISC01000077.1 Sinorhizobium meliloti strain M10 contig_77, whole genome shotgun sequence (36170 bp)
Overview 1 RT 1: 34093-36168 bp Neighborhood of RT #1 [34093, 36167] AraJ RVT-GII Feature: gene Location: 34093-35277 bp Feature: domain Description: AraJ Location: 34096-35254 bp Feature: domain Description: AraJ Location: 34096-35254 bp Feature: gene Location: 35225-35515 bp Feature: gene Location: 35925-36167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36069-36168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36069-36168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), RVT-GII