myRT

myRT report for GCA_009601355.1_ASM960135v1

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Seq: WISV01000149.1 Sinorhizobium meliloti strain T073 contig_149, whole genome shotgun sequence (125947 bp)
Overview 1 RT 1: 122129-125795 bp Neighborhood of RT #1 [122129, 125944] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 122129-123664 bp Feature: domain Description: hutH Location: 122138-123653 bp Feature: domain Description: hutH Location: 1 221 38-1 23653 bp Feature: gene Location: 123661-125031 bp Feature: domain Description: PRK09356 Location: 123820-125023 bp Feature: domain Description: PRK09356 Location: 1 23820-1 25023 bp Feature: gene Location: 125111-125944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125114-125525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 251 1 4-1 25525 bp Feature: domain Description: GIIM Note: maturase Location: 125579-125795 bp Feature: domain Description: GIIM Note: maturase Location: 1 25579-1 25795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: WISV01000188.1 Sinorhizobium meliloti strain T073 contig_188, whole genome shotgun sequence (15856 bp)
Overview 1 RT 1: 13606-15854 bp Neighborhood of RT #1 [13606, 15853] HTH_ARSR AraJ RVT-GII Feature: gene Location: 13606-13977 bp Feature: domain Description: HTH_ARSR Location: 13663-13861 bp Feature: domain Description: HTH_ARSR Location: 13663-13861 bp Feature: gene Location: 14067-15251 bp Feature: domain Description: AraJ Location: 14070-15228 bp Feature: domain Description: AraJ Location: 14070-152 2 8 bp Feature: gene Location: 15428-15853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15755-15854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15755-15854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WISV01000072.1 Sinorhizobium meliloti strain T073 contig_72, whole genome shotgun sequence (1507 bp)
Overview 1 RT 1: 58-1270 bp Neighborhood of RT #1 [58, 1419] RVT-GII GIIM Feature: gene Location: 58-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 85-1000 bp Feature: domain Description: GIIM Note: maturase Location: 1054-1270 bp Feature: domain Description: GIIM Note: maturase Location: 1054-1270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISV01000073.1 Sinorhizobium meliloti strain T073 contig_73, whole genome shotgun sequence (1507 bp)
Overview 1 RT 1: 58-1270 bp Neighborhood of RT #1 [58, 1419] RVT-GII GIIM Feature: gene Location: 58-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1000 bp Feature: domain Description: GIIM Note: maturase Location: 1054-1270 bp Feature: domain Description: GIIM Note: maturase Location: 1054 -1270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISV01000081.1 Sinorhizobium meliloti strain T073 contig_81, whole genome shotgun sequence (66575 bp)
Overview 1 RT 1: 1-1469 bp Neighborhood of RT #1 [1, 1477] RVT-GII GIIM MazF DUF3018 Feature: gene Location: 1-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-418 bp Feature: domain Description: GIIM Note: maturase Location: 472-688 bp Feature: domain Description: GIIM Note: maturase Location: 472-688 bp Feature: gene Location: 1137-1340 bp Feature: domain Description: MazF Location: 1140-1251 bp Feature: domain Description: MazF Location: 1140-125 1 bp Feature: gene Location: 1337-1477 bp Feature: domain Description: DUF3018 Location: 1340-1469 bp Feature: domain Description: DUF3018 Location: 1340-1469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazF (COG2337), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)