myRT

myRT report for GCA_009601415.1_ASM960141v1

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Seq: WISW01000108.1 Sinorhizobium meliloti strain T094 contig_108, whole genome shotgun sequence (1531 bp)
Overview 1 RT 1: 82-1294 bp Neighborhood of RT #1 [82, 1443] RVT-GII GIIM Feature: gene Location: 82-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1 024 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1 078-1 294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISW01000109.1 Sinorhizobium meliloti strain T094 contig_109, whole genome shotgun sequence (59261 bp)
Overview 1 RT 1: 1-1508 bp Neighborhood of RT #1 [1, 1508] RVT-GII Feature: gene Location: 1-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 8-430 bp Feature: gene Location: 607-870 bp Feature: gene Location: 1206-1508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISW01000110.1 Sinorhizobium meliloti strain T094 contig_110, whole genome shotgun sequence (146569 bp)
Overview 1 RT 1: 1-2135 bp Neighborhood of RT #1 [1, 2251] RVT-GII AraJ HTH_ARSR Feature: gene Location: 1-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 28-43 0 bp Feature: gene Location: 606-1790 bp Feature: domain Description: AraJ Location: 609-1767 bp Feature: domain Description: AraJ Location: 609-1767 bp Feature: gene Location: 1880-2251 bp Feature: domain Description: HTH_ARSR Location: 1937-2135 bp Feature: domain Description: HTH_ARSR Location: 193 7-213 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_ARSR (smart00418), AraJ (COG2814)

Seq: WISW01000117.1 Sinorhizobium meliloti strain T094 contig_117, whole genome shotgun sequence (27593 bp)
Overview 1 RT 1: 23775-27441 bp Neighborhood of RT #1 [23775, 27590] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 23775-25310 bp Feature: domain Description: hutH Location: 23784-25299 bp Feature: domain Description: hutH Location: 23784 -25299 bp Feature: gene Location: 25307-26677 bp Feature: domain Description: PRK09356 Location: 25466-26669 bp Feature: domain Description: PRK09356 Location: 254 66-26669 bp Feature: gene Location: 26757-27590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26760-27171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26760-27171 bp Feature: domain Description: GIIM Note: maturase Location: 27225-27441 bp Feature: domain Description: GIIM Note: maturase Location: 27225-274 4 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: WISW01000024.1 Sinorhizobium meliloti strain T094 contig_24, whole genome shotgun sequence (126523 bp)
Overview 1 RT 1: 125047-126371 bp Neighborhood of RT #1 [125047, 126520] DUF3018 MazF RVT-GII GIIM Feature: gene Location: 125047-125187 bp Feature: domain Description: DUF3018 Location: 125050-125179 bp Feature: domain Description: DUF3018 Location: 125 05 0-125 179 bp Feature: gene Location: 125184-125387 bp Feature: domain Description: MazF Location: 125187-125298 bp Feature: domain Description: MazF Location: 125 187-125 298 bp Feature: gene Location: 125687-126520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125690-126101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125 690-126101 bp Feature: domain Description: GIIM Note: maturase Location: 126155-126371 bp Feature: domain Description: GIIM Note: maturase Location: 12615 5 -126371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3018 (pfam11455), MazF (COG2337), RVT-GII, GIIM (pfam08388)

Seq: WISW01000029.1 Sinorhizobium meliloti strain T094 contig_29, whole genome shotgun sequence (1531 bp)
Overview 1 RT 1: 89-1301 bp Neighborhood of RT #1 [89, 1450] RVT-GII GIIM Feature: gene Location: 89-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416 -1031 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)