myRT

myRT report for GCA_009601585.1_ASM960158v1

Download annotations/find similar RTs

Seq: WISE01000011.1 Sinorhizobium meliloti strain M156 contig_11, whole genome shotgun sequence (23203 bp)
Overview 1 RT 1: 20209-22741 bp Neighborhood of RT #1 [20209, 23136] RVT-GII Feature: gene Location: 20209-20877 bp Feature: gene Location: 20978-21265 bp Feature: gene Location: 21313-23136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22051-22741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22051 -22741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISE01000114.1 Sinorhizobium meliloti strain M156 contig_114, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 3-1805 bp Neighborhood of RT #1 [3, 2200] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 3-275 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9-117 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9-117 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 135-246 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 135-2 46 bp Feature: gene Location: 377-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1115-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1115-1805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: WISE01000142.1 Sinorhizobium meliloti strain M156 contig_142, whole genome shotgun sequence (15851 bp)
Overview 1 RT 1: 13606-15849 bp Neighborhood of RT #1 [13606, 15848] HTH_ARSR AraJ RVT-GII Feature: gene Location: 13606-13977 bp Feature: domain Description: HTH_ARSR Location: 13663-13861 bp Feature: domain Description: HTH_ARSR Location: 13 663 -13 861 bp Feature: gene Location: 14066-15250 bp Feature: domain Description: AraJ Location: 14069-15227 bp Feature: domain Description: AraJ Location: 14069-15227 bp Feature: gene Location: 15606-15848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15750-15849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15750-15849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII

Seq: WISE01000171.1 Sinorhizobium meliloti strain M156 contig_171, whole genome shotgun sequence (7614 bp)
Overview 1 RT 1: 5159-7152 bp Neighborhood of RT #1 [5159, 7547] RVT-GII Feature: gene Location: 5159-5434 bp Feature: gene Location: 5444-5608 bp Feature: gene Location: 5724-7547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6462-7152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 62-7152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WISE01000186.1 Sinorhizobium meliloti strain M156 contig_186, whole genome shotgun sequence (16661 bp)
Overview 1 RT 1: 11730-13566 bp Neighborhood of RT #1 [11730, 13640] group_II_RT_mat RVT-GII LuxR_C_like Prok-TraM HTH_XRE Feature: gene Location: 11730-12062 bp Feature: gene Location: 12101-12532 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12308-12530 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12308-125 30 bp Feature: gene Location: 12545-12883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12551-12710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125 5 1-12710 bp Feature: domain Description: LuxR_C_like Location: 12740-12866 bp Feature: domain Description: LuxR_C_like Location: 12740-12866 bp Feature: gene Location: 12887-13207 bp Feature: domain Description: Prok-TraM Location: 12902-13187 bp Feature: domain Description: Prok-TraM Location: 12902-13187 bp Feature: gene Location: 13443-13640 bp Feature: domain Description: HTH_XRE Location: 13470-13566 bp Feature: domain Description: HTH_XRE Location: 13470-135 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, LuxR_C_like (cd06170), Prok-TraM (pfam09228), HTH_XRE (smart00530)

Seq: WISE01000202.1 Sinorhizobium meliloti strain M156 contig_202, whole genome shotgun sequence (2205 bp)
Overview 1 RT 1: 3-1751 bp Neighborhood of RT #1 [3, 2146] DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 3-221 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 81-192 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 81-192 bp Feature: gene Location: 323-2146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1061-1751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106 1-1751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: WISE01000209.1 Sinorhizobium meliloti strain M156 contig_209, whole genome shotgun sequence (154849 bp)
Overview 1 RT 1: 152572-154697 bp Neighborhood of RT #1 [152572, 154846] fabG DUF3018 RVT-GII GIIM Feature: gene Location: 152572-153354 bp Feature: domain Description: fabG Location: 152590-153340 bp Feature: domain Description: fabG Location: 152590-153340 bp Feature: gene Location: 153491-153631 bp Feature: domain Description: DUF3018 Location: 153494-153623 bp Feature: domain Description: DUF3018 Location: 153494-153623 bp Feature: gene Location: 154031-154846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154034-154427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154034-154427 bp Feature: domain Description: GIIM Note: maturase Location: 154481-154697 bp Feature: domain Description: GIIM Note: maturase Location: 154481-154697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fabG (PRK12825), DUF3018 (pfam11455), RVT-GII, GIIM (pfam08388)

Seq: WISE01000030.1 Sinorhizobium meliloti strain M156 contig_30, whole genome shotgun sequence (1309 bp)
Overview 1 RT 1: 1-1072 bp Neighborhood of RT #1 [1, 1221] RVT-GII GIIM Feature: gene Location: 1-1221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 7-8 02 bp Feature: domain Description: GIIM Note: maturase Location: 856-1072 bp Feature: domain Description: GIIM Note: maturase Location: 8 56-1072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISE01000031.1 Sinorhizobium meliloti strain M156 contig_31, whole genome shotgun sequence (1308 bp)
Overview 1 RT 1: 1-1071 bp Neighborhood of RT #1 [1, 1220] RVT-GII RVT-GII GIIM Feature: gene Location: 1-438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-409 bp Feature: gene Location: 513-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 516-801 bp Feature: domain Description: GIIM Note: maturase Location: 855-1071 bp Feature: domain Description: GIIM Note: maturase Location: 855-1071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WISE01000042.1 Sinorhizobium meliloti strain M156 contig_42, whole genome shotgun sequence (27265 bp)
Overview 1 RT 1: 25460-27263 bp Neighborhood of RT #1 [25460, 27262] DUF982 RVT-GII Feature: gene Location: 25460-25720 bp Feature: domain Description: DUF982 Location: 25493-25700 bp Feature: domain Description: DUF982 Location: 25493-25700 bp Feature: gene Location: 25764-26066 bp Feature: gene Location: 27020-27262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27164-27263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27164-27263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF982 (pfam06169), RVT-GII

Seq: WISE01000096.1 Sinorhizobium meliloti strain M156 contig_96, whole genome shotgun sequence (7354 bp)
Overview 1 RT 1: 3554-7202 bp Neighborhood of RT #1 [3554, 7351] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 3554-5089 bp Feature: domain Description: hutH Location: 3563-5078 bp Feature: domain Description: hutH Location: 3563-5078 bp Feature: gene Location: 5086-6456 bp Feature: domain Description: PRK09356 Location: 5245-6448 bp Feature: domain Description: PRK09356 Location: 5245-6448 bp Feature: gene Location: 6536-7351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6539-6932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6539-6932 bp Feature: domain Description: GIIM Note: maturase Location: 6986-7202 bp Feature: domain Description: GIIM Note: maturase Location: 6986-7202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)