myRT

myRT report for GCA_009604425.1_ASM960442v1

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Seq: WEGI01000001.1 Nocardia sp. RB56 NRB56_1, whole genome shotgun sequence (837037 bp)
Overview 1 RT 1: 450619-456840 bp Neighborhood of RT #1 [450619, 457709] RVT-GII GIIM STKc_PknB_like COG0610 Feature: gene Location: 450619-452091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450958-451654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 450958-451 654 bp Feature: domain Description: GIIM Note: maturase Location: 451723-451951 bp Feature: domain Description: GIIM Note: maturase Location: 451 723-451 951 bp Feature: gene Location: 452953-454536 bp Feature: domain Description: STKc_PknB_like Location: 452998-453826 bp Feature: domain Description: STKc_PknB_like Location: 452998-453826 bp Feature: gene Location: 454560-457709 bp Feature: domain Description: COG0610 Location: 454911-456840 bp Feature: domain Description: COG061 0 Location: 45491 1 -456840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), STKc_PknB_like (cd14014), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )

Seq: WEGI01000004.1 Nocardia sp. RB56 NRB56_4, whole genome shotgun sequence (542051 bp)
Overview 1 RT 1: 2-3885 bp Neighborhood of RT #1 [2, 3983] RVT-GII Big_10 YkuD_like Feature: gene Location: 2-1111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 -986 bp Feature: gene Location: 2115-2321 bp Feature: gene Location: 2838-3983 bp Feature: domain Description: Big_10 Location: 2970-3504 bp Feature: domain Description: Big_10 Location: 2 970-3504 bp Feature: domain Description: YkuD_like Location: 3528-3885 bp Feature: domain Description: YkuD_like Location: 352 8-3885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Big_10 (pfam17964), YkuD_like (cl21614)