myRT

myRT report for GCA_009617855.1_ASM961785v1

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Seq: BLAU01000001.1 Prolixibacter denitrificans MIC1-1 DNA, sequence1, whole genome shotgun sequence (4769871 bp)
Overview 1 RT 1: 3342227-3345721 bp 2 RT 2: 3673282-3677576 bp 3 RT 3: 3960694-3965057 bp 4 RT 4: 4023424-4035543 bp 5 RT 5: 4045003-4051638 bp 6 RT 6: 4059517-4064438 bp Neighborhood of RT #1 [3342227, 3345721] RVT-GII GIIM Neighborhood of RT #2 [3673282, 3677576] RVT-GII GIIM zf-ribbon_3 Neighborhood of RT #3 [3960694, 3965086] RVT-GII GIIM TonB_C Neighborhood of RT #4 [4023424, 4035543] AAA_13 RVT-GII GIIM N6_Mtase Type_ISP_C RVT-GII GIIM Fur Neighborhood of RT #5 [4045003, 4051838] P-type_ATPase_HM_ZosA_PfeT-like HMA CzcD RVT-GII GIIM AcrR Neighborhood of RT #6 [4059517, 4064438] RVT-GII GIIM PLDc_Nuc_like_unchar2 prok_dnaK Feature: gene Location: 3342227-3342457 bp Feature: gene Location: 3342709-3342894 bp Feature: gene Location: 3342934-3344259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3343138-3343753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33431 38-3343753 bp Feature: domain Description: GIIM Note: maturase Location: 3343825-3344038 bp Feature: domain Description: GIIM Note: maturase Location: 3343825-3344038 bp Feature: gene Location: 3344318-3344986 bp Feature: gene Location: 3345191-3345721 bp Feature: gene Location: 3673282-3673491 bp Feature: gene Location: 3673556-3674344 bp Feature: gene Location: 3674402-3675727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3674606-3675221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3674606-3675221 bp Feature: domain Description: GIIM Note: maturase Location: 3675293-3675506 bp Feature: domain Description: GIIM Note: maturase Location: 3675293-3675506 bp Feature: gene Location: 3676413-3677126 bp Feature: domain Description: zf-ribbon_3 Location: 3677058-3677121 bp Feature: domain Description: zf-ribbon_3 Location: 3677058-36771 21 bp Feature: gene Location: 3677187-3677576 bp Feature: gene Location: 3960694-3961362 bp Feature: gene Location: 3961375-3961656 bp Feature: gene Location: 3961692-3963017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3961896-3962511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3961 896-396251 1 bp Feature: domain Description: GIIM Note: maturase Location: 3962583-3962796 bp Feature: domain Description: GIIM Note: maturase Location: 3962583-3962796 bp Feature: gene Location: 3963745-3964446 bp Feature: gene Location: 3964670-3965086 bp Feature: domain Description: TonB_C Location: 3964850-3965057 bp Feature: domain Description: TonB_C Location: 3964850-3965057 bp Feature: gene Location: 4023424-4025946 bp Feature: domain Description: AAA_13 Location: 4023496-4025863 bp Feature: domain Description: AAA_1 3 Location: 4023496-4025863 bp Feature: gene Location: 4025950-4026111 bp Feature: gene Location: 4026147-4027472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4026351-4026966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4026351 -4026966 bp Feature: domain Description: GIIM Note: maturase Location: 4027038-4027251 bp Feature: domain Description: GIIM Note: maturase Location: 4027038-4027251 bp Feature: gene Location: 4028350-4031511 bp Feature: domain Description: N6_Mtase Location: 4029247-4030054 bp Feature: domain Description: N6_Mtase Location: 4029247-4030054 bp Feature: domain Description: Type_ISP_C Location: 4030432-4031488 bp Feature: domain Description: Type_ISP_C Location: 4030432-4031 488 bp Feature: gene Location: 4031512-4032186 bp Feature: gene Location: 4032188-4032352 bp Feature: gene Location: 4032429-4033724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4032624-4033239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4032624-4033239 bp Feature: domain Description: GIIM Note: maturase Location: 4033311-4033524 bp Feature: domain Description: GIIM Note: maturase Location: 403331 1 -4033524 bp Feature: gene Location: 4034660-4035073 bp Feature: domain Description: Fur Location: 4034666-4035071 bp Feature: domain Description: Fur Location: 4034666-4035071 bp Feature: gene Location: 4035145-4035543 bp Feature: gene Location: 4045003-4047507 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 4045597-4047493 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 4045597-4047493 bp Feature: gene Location: 4047512-4048306 bp Feature: domain Description: HMA Location: 4047530-4047689 bp Feature: domain Description: HMA Location: 4047530-4047689 bp Feature: domain Description: CzcD Location: 4047749-4048295 bp Feature: domain Description: CzcD Location: 4047749-4048295 bp Feature: gene Location: 4048921-4050216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4049116-4049731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40491 1 6-4049731 bp Feature: domain Description: GIIM Note: maturase Location: 4049803-4050016 bp Feature: domain Description: GIIM Note: maturase Location: 4049803-405001 6 bp Feature: gene Location: 4050980-4051201 bp Feature: gene Location: 4051257-4051838 bp Feature: domain Description: AcrR Location: 4051275-4051638 bp Feature: domain Description: AcrR Location: 4051 275-4051 638 bp Feature: gene Location: 4059517-4060893 bp Feature: gene Location: 4060910-4061209 bp Feature: gene Location: 4061246-4062541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4061441-4062056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4061 441 -4062056 bp Feature: domain Description: GIIM Note: maturase Location: 4062128-4062341 bp Feature: domain Description: GIIM Note: maturase Location: 40621 28-4062341 bp Feature: gene Location: 4063129-4064256 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 4063267-4063669 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 4063267-4063669 bp Feature: domain Description: prok_dnaK Location: 4063945-4064230 bp Feature: domain Description: prok_dnaK Location: 4063945-4064230 bp Feature: gene Location: 4064286-4064438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), zf-ribbon_3 (pfam13248), TonB_C (pfam03544), AAA_13 (pfam13166), N6_Mtase (pfam02384), Type_ISP_C (pfam18135), Fur (COG0735), P-type_ATPase_HM_ZosA_PfeT-like (cd07551), HMA (pfam00403)
CzcD (COG1230), AcrR (COG1309), PLDc_Nuc_like_unchar2 (cd09174), prok_dnaK (TIGR02350)