myRT

myRT report for GCA_009617895.1_ASM961789v1

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Seq: BLAW01000001.1 Prolixibacter sp. SD074 DNA, sequence1, whole genome shotgun sequence (3963877 bp)
Overview 1 RT 1: 1292830-1295495 bp 2 RT 2: 3233201-3236250 bp Neighborhood of RT #1 [1292830, 1295533] RVT-Retrons INT_IntI_C Neighborhood of RT #2 [3233201, 3236381] DUF4248 COG4737 RVT-GII GIIM Phage_int_SAM_5 INTN1_C_like Arm-DNA-bind_5 Feature: gene Location: 1292830-1292994 bp Feature: gene Location: 1293514-1293732 bp Feature: gene Location: 1294076-1294957 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1294253-1294778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 294253-1 294778 bp Feature: gene Location: 1294961-1295128 bp Feature: gene Location: 1295165-1295533 bp Feature: domain Description: INT_IntI_C Location: 1295297-1295495 bp Feature: domain Description: INT_IntI_C Location: 1 295297-1 295495 bp Feature: gene Location: 3233201-3233419 bp Feature: domain Description: DUF4248 Location: 3233276-3233396 bp Feature: domain Description: DUF4248 Location: 3233276-3233396 bp Feature: gene Location: 3233664-3234005 bp Feature: domain Description: COG4737 Location: 3233712-3233973 bp Feature: domain Description: COG4737 Location: 323371 2-3233973 bp Feature: gene Location: 3234333-3235439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3234378-3234996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3234378-3234996 bp Feature: domain Description: GIIM Note: maturase Location: 3235050-3235266 bp Feature: domain Description: GIIM Note: maturase Location: 3235050-3235266 bp Feature: gene Location: 3235513-3235932 bp Feature: domain Description: Phage_int_SAM_5 Location: 3235519-3235642 bp Feature: domain Description: Phage_int_SAM_5 Location: 323551 9-3235642 bp Feature: domain Description: INTN1_C_like Location: 3235696-3235918 bp Feature: domain Description: INTN1 _C_like Location: 3235696-323591 8 bp Feature: gene Location: 3235986-3236381 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3236013-3236250 bp Feature: domain Description: Arm-DNA-bind_5 Location: 323601 3-3236250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, INT_IntI_C (cd01193), DUF4248 (pfam14053), COG4737 (Uncharacterized protein ), RVT-GII, GIIM (pfam08388), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), Arm-DNA-bind_5 (pfam17293)