myRT

myRT report for GCA_009618275.1_ASM961827v1

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Seq: WIAD01000115.1 Roseimaritima sp. JC651 115_length=1810_depth=6.17x, whole genome shotgun sequence (1810 bp)
Overview 1 RT 1: 1-1747 bp Neighborhood of RT #1 [1, 1809] RVT-GII GIIM Feature: gene Location: 1-426 bp Feature: gene Location: 454-1809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1 477 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1747 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 9-1 747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WIAD01000017.1 Roseimaritima sp. JC651 17_length=96133_depth=0.91x, whole genome shotgun sequence (96133 bp)
Overview 1 RT 1: 74182-84118 bp Neighborhood of RT #1 [74182, 84118] RVT-GII GIIM TPR_12 TPR_12 TPR_12 TPR_12 TPR_12 TPR_12 TPR_10 TPR_12 TPR_12 TPR_10 CHAT Feature: gene Location: 74182-74589 bp Feature: gene Location: 74965-75300 bp Feature: gene Location: 75604-76797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75712-76402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75712 -76402 bp Feature: domain Description: GIIM Note: maturase Location: 76477-76693 bp Feature: domain Description: GIIM Note: maturase Location: 76477-76693 bp Feature: gene Location: 77785-82002 bp Feature: domain Description: TPR_12 Location: 77977-78121 bp Feature: domain Description: TPR_12 Location: 77977-7812 1 bp Feature: domain Description: TPR_12 Location: 78292-78487 bp Feature: domain Description: TPR_12 Location: 782 92 -78487 bp Feature: domain Description: TPR_12 Location: 78529-78748 bp Feature: domain Description: TPR_12 Location: 7852 9-78748 bp Feature: domain Description: TPR_12 Location: 78784-79000 bp Feature: domain Description: TPR_12 Location: 78784-79000 bp Feature: domain Description: TPR_12 Location: 79030-79249 bp Feature: domain Description: TPR_12 Location: 79030-792 49 bp Feature: domain Description: TPR_12 Location: 79282-79498 bp Feature: domain Description: TPR_12 Location: 792 82 -79498 bp Feature: domain Description: TPR_10 Location: 79534-79654 bp Feature: domain Description: TPR_10 Location: 79534-79654 bp Feature: domain Description: TPR_12 Location: 79669-79870 bp Feature: domain Description: TPR_12 Location: 79669-79870 bp Feature: domain Description: TPR_12 Location: 79924-80131 bp Feature: domain Description: TPR_12 Location: 7992 4-80131 bp Feature: domain Description: TPR_10 Location: 80164-80254 bp Feature: domain Description: TPR_10 Location: 80164-802 54 bp Feature: domain Description: CHAT Location: 80866-81994 bp Feature: domain Description: CHAT Location: 80866-81994 bp Feature: gene Location: 82466-84118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TPR_12 (pfam13424), TPR_10 (pfam13374), CHAT (pfam12770)

Seq: WIAD01000070.1 Roseimaritima sp. JC651 70_length=22144_depth=0.89x, whole genome shotgun sequence (22144 bp)
Overview 1 RT 1: 2-9310 bp Neighborhood of RT #1 [2, 9310] SdrD_B SdrD_B Calx_beta tand_rpt_95 tand_rpt_95 tand_rpt_95 tand_rpt_95 tand_rpt_95 tand_rpt_95 tand_rpt_95 RVT-GII GIIM Feature: gene Location: 2-5731 bp Feature: domain Description: SdrD_B Location: 743-863 bp Feature: domain Description: SdrD_B Location: 743 -863 bp Feature: domain Description: SdrD_B Location: 1610-1838 bp Feature: domain Description: SdrD_B Location: 1610-183 8 bp Feature: domain Description: Calx_beta Location: 2591-2807 bp Feature: domain Description: Calx_beta Location: 2591-2807 bp Feature: domain Description: tand_rpt_95 Location: 3473-3746 bp Feature: domain Description: tand_rpt_95 Location: 3 473 -3 746 bp Feature: domain Description: tand_rpt_95 Location: 3752-4025 bp Feature: domain Description: tand_rpt_95 Location: 3 752-4025 bp Feature: domain Description: tand_rpt_95 Location: 4559-4808 bp Feature: domain Description: tand_rpt_95 Location: 4559-4808 bp Feature: domain Description: tand_rpt_95 Location: 4817-5087 bp Feature: domain Description: tand_rpt_95 Location: 4817-5087 bp Feature: domain Description: tand_rpt_95 Location: 5093-5366 bp Feature: domain Description: tand_rpt_95 Location: 5093 -53 66 bp Feature: domain Description: tand_rpt_95 Location: 5372-5645 bp Feature: domain Description: tand_rpt_95 Location: 53 72-5645 bp Feature: domain Description: tand_rpt_95 Location: 5651-5729 bp Feature: domain Description: tand_rpt_95 Location: 5651-5729 bp Feature: gene Location: 6637-8022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7051-7678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7051-7678 bp Feature: domain Description: GIIM Note: maturase Location: 7723-7948 bp Feature: domain Description: GIIM Note: maturase Location: 7723 -7948 bp Feature: gene Location: 9065-9310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SdrD_B (pfam17210), Calx_beta (smart00237), tand_rpt_95 (NF012211), RVT-GII, GIIM (pfam08388)