myRT

myRT report for GCA_009646385.1_ASM964638v1

Download annotations/find similar RTs

Seq: WJBZ01000138.1 Bacillus thuringiensis strain 4XX5 NODE_138_length_2608_cov_288.763730, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 740-2393 bp Neighborhood of RT #1 [740, 2509] RVT-GII HNHc Feature: gene Location: 740-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1 694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJBZ01000146.1 Bacillus thuringiensis strain 4XX5 NODE_146_length_1975_cov_1320.094310, whole genome shotgun sequence (1975 bp)
Overview 1 RT 1: 167-1744 bp Neighborhood of RT #1 [167, 1827] RVT-GII GIIM Feature: gene Location: 167-346 bp Feature: gene Location: 496-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJBZ01000027.1 Bacillus thuringiensis strain 4XX5 NODE_27_length_62806_cov_74.449250, whole genome shotgun sequence (62806 bp)
Overview 1 RT 1: 15980-20736 bp Neighborhood of RT #1 [15980, 20747] RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Feature: gene Location: 15980-16486 bp Feature: domain Description: RimL Location: 15989-16484 bp Feature: domain Description: RimL Location: 15989-16484 bp Feature: gene Location: 16850-16981 bp Feature: gene Location: 16983-18806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17247-18081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17247-18081 bp Feature: domain Description: Intron_maturas2 Location: 18150-18489 bp Feature: domain Description: Intron_maturas2 Location: 18150-18489 bp Feature: domain Description: HNHc Note: nucleases Location: 18627-18783 bp Feature: domain Description: HNHc Note: nucleases Location: 18627-18783 bp Feature: gene Location: 19382-19963 bp Feature: domain Description: Lysozyme_like Location: 19517-19952 bp Feature: domain Description: Lysozyme_like Location: 19517-19952 bp Feature: gene Location: 20379-20747 bp Feature: domain Description: YxeA Location: 20430-20736 bp Feature: domain Description: YxeA Location: 2043 0-2073 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), YxeA (COG5294)

Seq: WJBZ01000039.1 Bacillus thuringiensis strain 4XX5 NODE_39_length_48137_cov_157.731814, whole genome shotgun sequence (48137 bp)
Overview 1 RT 1: 4838-10241 bp Neighborhood of RT #1 [4838, 10252] NupC NupC RVT-GII HNHc NupC Feature: gene Location: 4838-6019 bp Feature: domain Description: NupC Location: 4841-6017 bp Feature: domain Description: NupC Location: 4 84 1-6017 bp Feature: gene Location: 6369-6656 bp Feature: domain Description: NupC Location: 6375-6654 bp Feature: domain Description: NupC Location: 6375-6654 bp Feature: gene Location: 6822-8618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7116-7812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7116-7812 bp Feature: domain Description: HNHc Note: nucleases Location: 8412-8487 bp Feature: domain Description: HNHc Note: nucleases Location: 84 12-84 87 bp Feature: gene Location: 8792-8974 bp Feature: gene Location: 9347-10252 bp Feature: domain Description: NupC Location: 9350-10241 bp Feature: domain Description: NupC Location: 9350-1024 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NupC (COG1972), RVT-GII, HNHc (smart00507)