myRT

myRT report for GCA_009646655.1_ASM964665v1

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Seq: WJCO01000102.1 Bacillus thuringiensis strain 4L4 NODE_102_length_18065_cov_210.699133, whole genome shotgun sequence (18065 bp)
Overview 1 RT 1: 11034-16814 bp Neighborhood of RT #1 [11034, 16814] DUF3854 LPD1 RVT-GII HNHc Feature: gene Location: 11034-12347 bp Feature: domain Description: DUF3854 Location: 11979-12318 bp Feature: domain Description: DUF3854 Location: 1 1 979-1 231 8 bp Feature: gene Location: 12337-13134 bp Feature: domain Description: LPD1 Location: 12883-13078 bp Feature: domain Description: LPD1 Location: 1 2883-1 3078 bp Feature: gene Location: 13206-15002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13500-14196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3500-1 41 96 bp Feature: domain Description: HNHc Note: nucleases Location: 14796-14871 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4796-1 4871 bp Feature: gene Location: 15176-15358 bp Feature: gene Location: 15723-16814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), LPD1 (pfam18796), RVT-GII, HNHc (smart00507)

Seq: WJCO01000198.1 Bacillus thuringiensis strain 4L4 NODE_199_length_5602_cov_204.247240, whole genome shotgun sequence (5602 bp)
Overview 1 RT 1: 1-3413 bp Neighborhood of RT #1 [1, 3718] RVT-GII GIIM HNHc PinE Feature: gene Location: 1-438 bp Feature: gene Location: 535-720 bp Feature: gene Location: 929-2359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238-1973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 38-1973 bp Feature: domain Description: GIIM Note: maturase Location: 2042-2174 bp Feature: domain Description: GIIM Note: maturase Location: 2 042 -2 174 bp Feature: gene Location: 2405-2779 bp Feature: domain Description: HNHc Note: nucleases Location: 2495-2663 bp Feature: domain Description: HNHc Note: nucleases Location: 2 495-2 663 bp Feature: gene Location: 2915-3718 bp Feature: domain Description: PinE Location: 2924-3413 bp Feature: domain Description: PinE Location: 2 92 4-3413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), PinE (COG1961)

Seq: WJCO01000221.1 Bacillus thuringiensis strain 4L4 NODE_222_length_4098_cov_323.317334, whole genome shotgun sequence (4098 bp)
Overview 1 RT 1: 107-4067 bp Neighborhood of RT #1 [107, 4096] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2579-2725 bp Feature: gene Location: 2864-4096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2870-3371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2870-3 3 71 bp Feature: domain Description: Intron_maturas2 Location: 3443-3761 bp Feature: domain Description: Intron_maturas2 Location: 3 443 -3 761 bp Feature: domain Description: HNHc Note: nucleases Location: 3911-4067 bp Feature: domain Description: HNHc Note: nucleases Location: 3 911-4067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJCO01000240.1 Bacillus thuringiensis strain 4L4 NODE_241_length_3218_cov_387.959249, whole genome shotgun sequence (3218 bp)
Overview 1 RT 1: 1-3216 bp Neighborhood of RT #1 [1, 3216] RVT-GII GIIM Feature: gene Location: 1-195 bp Feature: gene Location: 942-2807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1242-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124 2-194 7 bp Feature: domain Description: GIIM Note: maturase Location: 2034-2217 bp Feature: domain Description: GIIM Note: maturase Location: 2034 -2217 bp Feature: gene Location: 3085-3216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCO01000256.1 Bacillus thuringiensis strain 4L4 NODE_257_length_2608_cov_338.868431, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 8-105 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615 -175 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJCO01000273.1 Bacillus thuringiensis strain 4L4 NODE_274_length_2143_cov_269.506776, whole genome shotgun sequence (2143 bp)
Overview 1 RT 1: 3-1503 bp Neighborhood of RT #1 [3, 1556] RVT-GII Intron_maturas2 Feature: gene Location: 3-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267-1101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 7-1101 bp Feature: domain Description: Intron_maturas2 Location: 1170-1503 bp Feature: domain Description: Intron_maturas2 Location: 1170-1503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: WJCO01000283.1 Bacillus thuringiensis strain 4L4 NODE_284_length_1972_cov_1488.776781, whole genome shotgun sequence (1972 bp)
Overview 1 RT 1: 146-1806 bp Neighborhood of RT #1 [146, 1806] RVT-GII GIIM Feature: gene Location: 146-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1091 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1394 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1394 bp Feature: gene Location: 1627-1806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCO01000315.1 Bacillus thuringiensis strain 4L4 NODE_318_length_1254_cov_470.537808, whole genome shotgun sequence (1254 bp)
Overview 1 RT 1: 3-588 bp Neighborhood of RT #1 [3, 590] RVT-GII Feature: gene Location: 3-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-58 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCO01000317.1 Bacillus thuringiensis strain 4L4 NODE_320_length_1208_cov_326.375774, whole genome shotgun sequence (1208 bp)
Overview 1 RT 1: 3-594 bp Neighborhood of RT #1 [3, 596] RVT-GII Feature: gene Location: 3-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273-594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273-59 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCO01000333.1 Bacillus thuringiensis strain 4L4 NODE_339_length_975_cov_460.618040, whole genome shotgun sequence (975 bp)
Overview 1 RT 1: 2-668 bp Neighborhood of RT #1 [2, 973] RVT-GII GIIM Feature: gene Location: 2-973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-386 bp Feature: domain Description: GIIM Note: maturase Location: 500-668 bp Feature: domain Description: GIIM Note: maturase Location: 500-668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCO01000590.1 Bacillus thuringiensis strain 4L4 NODE_720_length_308_cov_0.701299, whole genome shotgun sequence (308 bp)
Overview 1 RT 1: 66-270 bp Neighborhood of RT #1 [66, 305] RVT-UNC Feature: gene Location: 66-305 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 75-270 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 75-270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-CRISPR-like/RVT-CRISPR(RVT-UNC)