myRT

myRT report for GCA_009646715.1_ASM964671v1

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Seq: WJCQ01000102.1 Bacillus thuringiensis strain 4L1 NODE_102_length_18065_cov_228.735324, whole genome shotgun sequence (18065 bp)
Overview 1 RT 1: 11034-16814 bp Neighborhood of RT #1 [11034, 16814] DUF3854 LPD1 RVT-GII HNHc Feature: gene Location: 11034-12347 bp Feature: domain Description: DUF3854 Location: 11979-12318 bp Feature: domain Description: DUF3854 Location: 1 1 979-1 231 8 bp Feature: gene Location: 12337-13134 bp Feature: domain Description: LPD1 Location: 12883-13078 bp Feature: domain Description: LPD1 Location: 1 2883-1 3078 bp Feature: gene Location: 13206-15002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13500-14196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3500-1 41 96 bp Feature: domain Description: HNHc Note: nucleases Location: 14796-14871 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4796-1 4871 bp Feature: gene Location: 15176-15358 bp Feature: gene Location: 15723-16814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), LPD1 (pfam18796), RVT-GII, HNHc (smart00507)

Seq: WJCQ01000194.1 Bacillus thuringiensis strain 4L1 NODE_195_length_5602_cov_228.330317, whole genome shotgun sequence (5602 bp)
Overview 1 RT 1: 1-3413 bp Neighborhood of RT #1 [1, 3718] RVT-GII GIIM HNHc PinE Feature: gene Location: 1-438 bp Feature: gene Location: 535-720 bp Feature: gene Location: 929-2359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1238-1973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 38-1973 bp Feature: domain Description: GIIM Note: maturase Location: 2042-2174 bp Feature: domain Description: GIIM Note: maturase Location: 2 042 -2 174 bp Feature: gene Location: 2405-2779 bp Feature: domain Description: HNHc Note: nucleases Location: 2495-2663 bp Feature: domain Description: HNHc Note: nucleases Location: 2 495-2 663 bp Feature: gene Location: 2915-3718 bp Feature: domain Description: PinE Location: 2924-3413 bp Feature: domain Description: PinE Location: 2 92 4-3413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), PinE (COG1961), RVT-GII, GIIM (pfam08388)

Seq: WJCQ01000213.1 Bacillus thuringiensis strain 4L1 NODE_214_length_4098_cov_345.966924, whole genome shotgun sequence (4098 bp)
Overview 1 RT 1: 3-3867 bp Neighborhood of RT #1 [3, 3992] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 3-1235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-510 bp Feature: domain Description: Intron_maturas2 Location: 582-900 bp Feature: domain Description: Intron_maturas2 Location: 582-900 bp Feature: domain Description: HNHc Note: nucleases Location: 1050-1206 bp Feature: domain Description: HNHc Note: nucleases Location: 1050-1206 bp Feature: gene Location: 1374-1520 bp Feature: gene Location: 2202-3992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2499-3195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2499-3 195 bp Feature: domain Description: HNHc Note: nucleases Location: 3735-3867 bp Feature: domain Description: HNHc Note: nucleases Location: 3 73 5-3 867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJCQ01000234.1 Bacillus thuringiensis strain 4L1 NODE_235_length_2911_cov_463.047283, whole genome shotgun sequence (2911 bp)
Overview 1 RT 1: 779-2054 bp Neighborhood of RT #1 [779, 2644] RVT-GII GIIM Feature: gene Location: 779-2644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1079-1784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1079-1784 bp Feature: domain Description: GIIM Note: maturase Location: 1871-2054 bp Feature: domain Description: GIIM Note: maturase Location: 1871-2054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCQ01000238.1 Bacillus thuringiensis strain 4L1 NODE_239_length_2609_cov_331.527646, whole genome shotgun sequence (2609 bp)
Overview 1 RT 1: 101-1754 bp Neighborhood of RT #1 [101, 1870] RVT-GII HNHc Feature: gene Location: 101-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359-1055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 9-105 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1616-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1616-175 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJCQ01000250.1 Bacillus thuringiensis strain 4L1 NODE_251_length_2143_cov_292.472410, whole genome shotgun sequence (2143 bp)
Overview 1 RT 1: 588-2088 bp Neighborhood of RT #1 [588, 2141] RVT-GII Intron_maturas2 Feature: gene Location: 588-2141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-16 86 bp Feature: domain Description: Intron_maturas2 Location: 1755-2088 bp Feature: domain Description: Intron_maturas2 Location: 1755-2088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: WJCQ01000257.1 Bacillus thuringiensis strain 4L1 NODE_258_length_1975_cov_1286.365648, whole genome shotgun sequence (1975 bp)
Overview 1 RT 1: 170-1747 bp Neighborhood of RT #1 [170, 1830] RVT-GII GIIM Feature: gene Location: 170-349 bp Feature: gene Location: 499-1830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808-1447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808-1447 bp Feature: domain Description: GIIM Note: maturase Location: 1522-1747 bp Feature: domain Description: GIIM Note: maturase Location: 1522-17 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCQ01000283.1 Bacillus thuringiensis strain 4L1 NODE_286_length_1254_cov_492.903144, whole genome shotgun sequence (1254 bp)
Overview 1 RT 1: 665-1250 bp Neighborhood of RT #1 [665, 1252] RVT-GII Feature: gene Location: 665-1252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCQ01000284.1 Bacillus thuringiensis strain 4L1 NODE_287_length_1208_cov_345.962865, whole genome shotgun sequence (1208 bp)
Overview 1 RT 1: 3-594 bp Neighborhood of RT #1 [3, 596] RVT-GII Feature: gene Location: 3-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273-594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273-59 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCQ01000296.1 Bacillus thuringiensis strain 4L1 NODE_300_length_975_cov_483.261693, whole genome shotgun sequence (975 bp)
Overview 1 RT 1: 3-669 bp Neighborhood of RT #1 [3, 974] RVT-GII GIIM Feature: gene Location: 3-974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-387 bp Feature: domain Description: GIIM Note: maturase Location: 501-669 bp Feature: domain Description: GIIM Note: maturase Location: 501-669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)