myRT

myRT report for GCA_009646735.1_ASM964673v1

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Seq: WJCP01000521.1 Bacillus thuringiensis strain 4L2 NODE_1250_length_268_cov_0.942408, whole genome shotgun sequence (268 bp)
Overview 1 RT 1: 1-265 bp Neighborhood of RT #1 [1, 267] RVT-GII Feature: gene Location: 1-267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCP01000177.1 Bacillus thuringiensis strain 4L2 NODE_177_length_5602_cov_136.659186, whole genome shotgun sequence (5602 bp)
Overview 1 RT 1: 1885-5599 bp Neighborhood of RT #1 [1885, 5599] PinE HNHc RVT-GII GIIM Feature: gene Location: 1885-2688 bp Feature: domain Description: PinE Location: 1894-2383 bp Feature: domain Description: PinE Location: 1894-2 383 bp Feature: gene Location: 2824-3198 bp Feature: domain Description: HNHc Note: nucleases Location: 2914-3082 bp Feature: domain Description: HNHc Note: nucleases Location: 2 914-3082 bp Feature: gene Location: 3244-4674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3553-4288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3553-42 88 bp Feature: domain Description: GIIM Note: maturase Location: 4357-4489 bp Feature: domain Description: GIIM Note: maturase Location: 4357-4489 bp Feature: gene Location: 4883-5068 bp Feature: gene Location: 5165-5599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), HNHc (smart00507), RVT-GII, GIIM (pfam08388)

Seq: WJCP01000194.1 Bacillus thuringiensis strain 4L2 NODE_195_length_4098_cov_220.267844, whole genome shotgun sequence (4098 bp)
Overview 1 RT 1: 107-4067 bp Neighborhood of RT #1 [107, 4096] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2579-2725 bp Feature: gene Location: 2864-4096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2870-3371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2870-3 3 71 bp Feature: domain Description: Intron_maturas2 Location: 3443-3761 bp Feature: domain Description: Intron_maturas2 Location: 3 443 -3 761 bp Feature: domain Description: HNHc Note: nucleases Location: 3911-4067 bp Feature: domain Description: HNHc Note: nucleases Location: 3 911-4067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJCP01000209.1 Bacillus thuringiensis strain 4L2 NODE_210_length_3218_cov_232.260745, whole genome shotgun sequence (3218 bp)
Overview 1 RT 1: 3-3215 bp Neighborhood of RT #1 [3, 3215] RVT-GII GIIM Feature: gene Location: 3-134 bp Feature: gene Location: 412-2277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-1417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712-14 17 bp Feature: domain Description: GIIM Note: maturase Location: 1504-1687 bp Feature: domain Description: GIIM Note: maturase Location: 1504 -1687 bp Feature: gene Location: 3024-3215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCP01000223.1 Bacillus thuringiensis strain 4L2 NODE_224_length_2609_cov_279.289100, whole genome shotgun sequence (2609 bp)
Overview 1 RT 1: 101-1754 bp Neighborhood of RT #1 [101, 1870] RVT-GII HNHc Feature: gene Location: 101-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359-1055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 9-105 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1616-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1616-175 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJCP01000233.1 Bacillus thuringiensis strain 4L2 NODE_234_length_2143_cov_250.848500, whole genome shotgun sequence (2143 bp)
Overview 1 RT 1: 3-1503 bp Neighborhood of RT #1 [3, 1556] RVT-GII Intron_maturas2 Feature: gene Location: 3-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267-1101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 7-1101 bp Feature: domain Description: Intron_maturas2 Location: 1170-1503 bp Feature: domain Description: Intron_maturas2 Location: 1170-1503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: WJCP01000236.1 Bacillus thuringiensis strain 4L2 NODE_238_length_1972_cov_1098.889710, whole genome shotgun sequence (1972 bp)
Overview 1 RT 1: 167-1744 bp Neighborhood of RT #1 [167, 1827] RVT-GII GIIM Feature: gene Location: 167-346 bp Feature: gene Location: 496-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Feature: domain Description: GIIM Note: maturase Location: 1519-17 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCP01000238.1 Bacillus thuringiensis strain 4L2 NODE_240_length_1843_cov_208.986976, whole genome shotgun sequence (1843 bp)
Overview 1 RT 1: 2-1840 bp Neighborhood of RT #1 [2, 1840] RVT-GII Feature: gene Location: 2-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302-698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302-698 bp Feature: gene Location: 1370-1840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCP01000258.1 Bacillus thuringiensis strain 4L2 NODE_264_length_1208_cov_216.389036, whole genome shotgun sequence (1208 bp)
Overview 1 RT 1: 613-1204 bp Neighborhood of RT #1 [613, 1206] RVT-GII Feature: gene Location: 613-1206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCP01000271.1 Bacillus thuringiensis strain 4L2 NODE_278_length_975_cov_301.615813, whole genome shotgun sequence (975 bp)
Overview 1 RT 1: 2-668 bp Neighborhood of RT #1 [2, 973] RVT-GII GIIM Feature: gene Location: 2-973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-386 bp Feature: domain Description: GIIM Note: maturase Location: 500-668 bp Feature: domain Description: GIIM Note: maturase Location: 500-668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJCP01000086.1 Bacillus thuringiensis strain 4L2 NODE_86_length_21633_cov_75.328911, whole genome shotgun sequence (21633 bp)
Overview 1 RT 1: 3-4101 bp Neighborhood of RT #1 [3, 4154] RVT_N RVT-GII GIIM HTH_TipAL-Mta TipAS DUF2187 Feature: gene Location: 3-134 bp Feature: gene Location: 256-1917 bp Feature: RT Description: RVT_N Location: 304-550 bp Feature: RT Description: RVT_N Location: 304-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1333-1564 bp Feature: domain Description: GIIM Note: maturase Location: 1333-1564 bp Feature: gene Location: 2582-3367 bp Feature: domain Description: HTH_TipAL-Mta Location: 2603-2915 bp Feature: domain Description: HTH_TipAL-Mta Location: 2603-2915 bp Feature: domain Description: TipAS Location: 3023-3320 bp Feature: domain Description: TipAS Location: 3023-3320 bp Feature: gene Location: 3918-4154 bp Feature: domain Description: DUF2187 Location: 3942-4101 bp Feature: domain Description: DUF2187 Location: 3942-4101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_TipAL-Mta (cd01106), TipAS (pfam07739)

Seq: WJCP01000097.1 Bacillus thuringiensis strain 4L2 NODE_97_length_17954_cov_142.229345, whole genome shotgun sequence (17954 bp)
Overview 1 RT 1: 10923-16703 bp Neighborhood of RT #1 [10923, 16703] DUF3854 LPD1 RVT-GII HNHc Feature: gene Location: 10923-12236 bp Feature: domain Description: DUF3854 Location: 11868-12207 bp Feature: domain Description: DUF3854 Location: 11868-12 207 bp Feature: gene Location: 12226-13023 bp Feature: domain Description: LPD1 Location: 12772-12967 bp Feature: domain Description: LPD1 Location: 12 772-12 967 bp Feature: gene Location: 13095-14891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13389-14085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13389-14085 bp Feature: domain Description: HNHc Note: nucleases Location: 14685-14760 bp Feature: domain Description: HNHc Note: nucleases Location: 14685-14760 bp Feature: gene Location: 15065-15247 bp Feature: gene Location: 15612-16703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), LPD1 (pfam18796), RVT-GII, HNHc (smart00507)