myRT

myRT report for GCA_009646775.1_ASM964677v1

Download annotations/find similar RTs

Seq: WJCT01000012.1 Bacillus thuringiensis strain 4K3 NODE_12_length_141997_cov_77.500951, whole genome shotgun sequence (141997 bp)
Overview 1 RT 1: 97523-101248 bp Neighborhood of RT #1 [97523, 101248] Peptidases_S8_Subtilisin_subset RVT-GII RVT-GII Feature: gene Location: 97523-98308 bp Feature: gene Location: 98324-99295 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 98543-99191 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 98543-991 91 bp Feature: gene Location: 99843-100328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99849-100149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99849-1 001 49 bp Feature: gene Location: 100403-100669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100421-100640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00421 -1 00640 bp Feature: gene Location: 100805-100957 bp Feature: gene Location: 100979-101248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_Subtilisin_subset (cd07477), RVT-GII

Seq: WJCT01000014.1 Bacillus thuringiensis strain 4K3 NODE_14_length_136742_cov_62.999129, whole genome shotgun sequence (136742 bp)
Overview 1 RT 1: 133210-136551 bp Neighborhood of RT #1 [133210, 136583] LbH_gamma_CA RVT-GII Intron_maturas2 HNHc SH3b Feature: gene Location: 133210-133905 bp Feature: domain Description: LbH_gamma_CA Location: 133333-133852 bp Feature: domain Description: LbH_gamma_CA Location: 133333-133852 bp Feature: gene Location: 134524-134811 bp Feature: gene Location: 134958-135515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134970-135159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134970-135159 bp Feature: domain Description: Intron_maturas2 Location: 135246-135510 bp Feature: domain Description: Intron_maturas2 Location: 1352 46-135510 bp Feature: gene Location: 135659-135868 bp Feature: domain Description: HNHc Note: nucleases Location: 135674-135851 bp Feature: domain Description: HNHc Note: nucleases Location: 135674-135851 bp Feature: gene Location: 136344-136583 bp Feature: domain Description: SH3b Location: 136419-136551 bp Feature: domain Description: SH3b Location: 136419-136551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_gamma_CA (cd00710), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SH3b (smart00287)

Seq: WJCT01000161.1 Bacillus thuringiensis strain 4K3 NODE_187_length_440_cov_0.421488, whole genome shotgun sequence (440 bp)
Overview 1 RT 1: 41-329 bp Neighborhood of RT #1 [41, 349] RVT-UNC Feature: gene Location: 41-349 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 50-329 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 50-3 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-GII/RVT-UG3(RVT-UNC)

Seq: WJCT01000206.1 Bacillus thuringiensis strain 4K3 NODE_273_length_346_cov_0.542751, whole genome shotgun sequence (346 bp)
Overview 1 RT 1: 3-222 bp Neighborhood of RT #1 [3, 344] RVT-G2L Feature: gene Location: 3-344 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 78-222 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 78-222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L

Seq: WJCT01000003.1 Bacillus thuringiensis strain 4K3 NODE_3_length_312163_cov_51.720551, whole genome shotgun sequence (312163 bp)
Overview 1 RT 1: 25355-29879 bp Neighborhood of RT #1 [25355, 29890] RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Feature: gene Location: 25355-25861 bp Feature: domain Description: RimL Location: 25364-25859 bp Feature: domain Description: RimL Location: 25 364-25 85 9 bp Feature: gene Location: 26230-26361 bp Feature: gene Location: 26363-28186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26627-27461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26627-27461 bp Feature: domain Description: Intron_maturas2 Location: 27533-27947 bp Feature: domain Description: Intron_maturas2 Location: 275 33-27947 bp Feature: domain Description: HNHc Note: nucleases Location: 28007-28160 bp Feature: domain Description: HNHc Note: nucleases Location: 28007-28160 bp Feature: gene Location: 28762-29343 bp Feature: domain Description: Lysozyme_like Location: 28897-29332 bp Feature: domain Description: Lysozyme_like Location: 28897-29332 bp Feature: gene Location: 29759-29890 bp Feature: domain Description: YxeA Location: 29786-29879 bp Feature: domain Description: YxeA Location: 29786-29879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), YxeA (COG5294)

Seq: WJCT01000258.1 Bacillus thuringiensis strain 4K3 NODE_403_length_279_cov_0.787129, whole genome shotgun sequence (279 bp)
Overview 1 RT 1: 1-244 bp Neighborhood of RT #1 [1, 276] RVT-GII Feature: gene Location: 1-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJCT01000049.1 Bacillus thuringiensis strain 4K3 NODE_49_length_27102_cov_64.616318, whole genome shotgun sequence (27102 bp)
Overview 1 RT 1: 11004-15356 bp Neighborhood of RT #1 [11004, 15361] Transposase_20 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 11004-11246 bp Feature: domain Description: Transposase_20 Location: 11040-11184 bp Feature: domain Description: Transposase_20 Location: 11040-11184 bp Feature: gene Location: 12599-12868 bp Feature: gene Location: 13138-14442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13423-14062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13423-14062 bp Feature: domain Description: GIIM Note: maturase Location: 14137-14362 bp Feature: domain Description: GIIM Note: maturase Location: 14137 -14362 bp Feature: gene Location: 14616-14795 bp Feature: gene Location: 14987-15361 bp Feature: domain Description: DDE_Tnp_1 Location: 15071-15356 bp Feature: domain Description: DDE_Tnp_1 Location: 1507 1-15356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)