myRT

myRT report for GCA_009646975.1_ASM964697v1

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Seq: WJDC01000104.1 Bacillus thuringiensis strain 4G2 NODE_104_length_14858_cov_80.991137, whole genome shotgun sequence (14858 bp)
Overview 1 RT 1: 7312-10706 bp Neighborhood of RT #1 [7312, 10706] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 7312-7668 bp Feature: domain Description: DDE_Tnp_1 Location: 7468-7654 bp Feature: domain Description: DDE_Tnp_1 Location: 7468-7654 bp Feature: gene Location: 7820-7999 bp Feature: gene Location: 8149-9480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8458-9097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8458-9097 bp Feature: domain Description: GIIM Note: maturase Location: 9172-9397 bp Feature: domain Description: GIIM Note: maturase Location: 91 72-9397 bp Feature: gene Location: 9756-10013 bp Feature: gene Location: 10314-10706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: WJDC01000106.1 Bacillus thuringiensis strain 4G2 NODE_106_length_14708_cov_48.600779, whole genome shotgun sequence (14708 bp)
Overview 1 RT 1: 1325-5672 bp Neighborhood of RT #1 [1325, 5674] Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 1325-1459 bp Feature: gene Location: 1691-2272 bp Feature: domain Description: Lysozyme_like Location: 1826-2261 bp Feature: domain Description: Lysozyme_like Location: 182 6-2 2 61 bp Feature: gene Location: 2848-4671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3112-3946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3112 -3946 bp Feature: domain Description: Intron_maturas2 Location: 4015-4354 bp Feature: domain Description: Intron_maturas2 Location: 4015-4354 bp Feature: domain Description: HNHc Note: nucleases Location: 4492-4648 bp Feature: domain Description: HNHc Note: nucleases Location: 4492 -4648 bp Feature: gene Location: 4673-4804 bp Feature: gene Location: 5168-5674 bp Feature: domain Description: RimL Location: 5177-5672 bp Feature: domain Description: RimL Location: 5177-5672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670)

Seq: WJDC01000156.1 Bacillus thuringiensis strain 4G2 NODE_156_length_5506_cov_107.621293, whole genome shotgun sequence (5506 bp)
Overview 1 RT 1: 78-5128 bp Neighborhood of RT #1 [78, 5128] RVT-GII GIIM Ftsk_gamma Feature: gene Location: 78-281 bp Feature: gene Location: 953-2827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1253-1958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1253 -1958 bp Feature: domain Description: GIIM Note: maturase Location: 2072-2240 bp Feature: domain Description: GIIM Note: maturase Location: 2072-2240 bp Feature: gene Location: 3168-4742 bp Feature: domain Description: Ftsk_gamma Location: 3795-3975 bp Feature: domain Description: Ftsk_gamma Location: 3 795-3 975 bp Feature: gene Location: 4901-5128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388)

Seq: WJDC01000176.1 Bacillus thuringiensis strain 4G2 NODE_177_length_2892_cov_158.894139, whole genome shotgun sequence (2892 bp)
Overview 1 RT 1: 581-1837 bp Neighborhood of RT #1 [581, 2712] RVT-GII Feature: gene Location: 581-784 bp Feature: gene Location: 907-2712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102-1837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDC01000192.1 Bacillus thuringiensis strain 4G2 NODE_193_length_1997_cov_284.520833, whole genome shotgun sequence (1997 bp)
Overview 1 RT 1: 77-1865 bp Neighborhood of RT #1 [77, 1894] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 77-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: Intron_maturas2 Location: 125 0-15 44 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDC01000088.1 Bacillus thuringiensis strain 4G2 NODE_88_length_18193_cov_101.374089, whole genome shotgun sequence (18193 bp)
Overview 1 RT 1: 3525-10403 bp Neighborhood of RT #1 [3525, 10403] DEXDc RVT-GII Intron_maturas2 HNHc SF2_C_SNF Feature: gene Location: 3525-3752 bp Feature: gene Location: 3776-5578 bp Feature: domain Description: DEXDc Location: 4604-5555 bp Feature: domain Description: DEXDc Location: 46 04-5555 bp Feature: gene Location: 6182-8017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6449-7280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 449-7280 bp Feature: domain Description: Intron_maturas2 Location: 7349-7724 bp Feature: domain Description: Intron_maturas2 Location: 7349-7724 bp Feature: domain Description: HNHc Note: nucleases Location: 7817-7964 bp Feature: domain Description: HNHc Note: nucleases Location: 7817-796 4 bp Feature: gene Location: 8171-9673 bp Feature: domain Description: SF2_C_SNF Location: 8822-9065 bp Feature: domain Description: SF2_C_SNF Location: 8822-906 5 bp Feature: gene Location: 9690-10403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793)