myRT

myRT report for GCA_009646985.1_ASM964698v1

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Seq: WJDE01000105.1 Bacillus thuringiensis strain 4F4 NODE_105_length_10699_cov_130.273018, whole genome shotgun sequence (10699 bp)
Overview 1 RT 1: 1-5664 bp Neighborhood of RT #1 [1, 5664] LPD1 RVT-GII HNHc Feature: gene Location: 1-1197 bp Feature: gene Location: 1187-1984 bp Feature: domain Description: LPD1 Location: 1733-1928 bp Feature: domain Description: LPD1 Location: 1 733-1 928 bp Feature: gene Location: 2056-3852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2350-3046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2350-3046 bp Feature: domain Description: HNHc Note: nucleases Location: 3646-3721 bp Feature: domain Description: HNHc Note: nucleases Location: 3646-3721 bp Feature: gene Location: 4026-4244 bp Feature: gene Location: 4573-5664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), RVT-GII, HNHc (smart00507)

Seq: WJDE01000129.1 Bacillus thuringiensis strain 4F4 NODE_129_length_5299_cov_217.932593, whole genome shotgun sequence (5299 bp)
Overview 1 RT 1: 107-4658 bp Neighborhood of RT #1 [107, 4687] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2579-2725 bp Feature: gene Location: 2864-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJDE01000153.1 Bacillus thuringiensis strain 4F4 NODE_154_length_2687_cov_287.397318, whole genome shotgun sequence (2687 bp)
Overview 1 RT 1: 170-2455 bp Neighborhood of RT #1 [170, 2571] RVT-GII HNHc Feature: gene Location: 170-346 bp Feature: gene Location: 739-2571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1039-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 9-1744 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-2455 bp Feature: domain Description: HNHc Note: nucleases Location: 23 23 -2455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDE01000154.1 Bacillus thuringiensis strain 4F4 NODE_155_length_2608_cov_419.437772, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDE01000157.1 Bacillus thuringiensis strain 4F4 NODE_158_length_2532_cov_252.559267, whole genome shotgun sequence (2532 bp)
Overview 1 RT 1: 122-1922 bp Neighborhood of RT #1 [122, 1945] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 122-1945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1220 bp Feature: domain Description: Intron_maturas2 Location: 1289-1628 bp Feature: domain Description: Intron_maturas2 Location: 1289-1628 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDE01000160.1 Bacillus thuringiensis strain 4F4 NODE_161_length_2259_cov_202.835472, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 3-1290 bp Neighborhood of RT #1 [3, 1595] RVT-GII GIIM Feature: gene Location: 3-1595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-1008 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1290 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDE01000237.1 Bacillus thuringiensis strain 4F4 NODE_268_length_467_cov_1.010256, whole genome shotgun sequence (467 bp)
Overview 1 RT 1: 3-459 bp Neighborhood of RT #1 [3, 464] RVT-GII Feature: gene Location: 3-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156-459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156-459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDE01000257.1 Bacillus thuringiensis strain 4F4 NODE_295_length_421_cov_0.776163, whole genome shotgun sequence (421 bp)
Overview 1 RT 1: 143-350 bp Neighborhood of RT #1 [143, 418] RVT-GII Feature: gene Location: 143-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164-350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164-350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDE01000276.1 Bacillus thuringiensis strain 4F4 NODE_322_length_387_cov_2.119355, whole genome shotgun sequence (387 bp)
Overview 1 RT 1: 1-385 bp Neighborhood of RT #1 [1, 384] RVT-GII Feature: gene Location: 1-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDE01000327.1 Bacillus thuringiensis strain 4F4 NODE_388_length_333_cov_1.996094, whole genome shotgun sequence (333 bp)
Overview 1 RT 1: 3-126 bp Neighborhood of RT #1 [3, 332] RVT-GII Feature: gene Location: 3-332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDE01000063.1 Bacillus thuringiensis strain 4F4 NODE_63_length_31605_cov_129.103527, whole genome shotgun sequence (31605 bp)
Overview 1 RT 1: 33-8202 bp Neighborhood of RT #1 [33, 8202] RVT-GII GIIM DEXDc_RapA DEXHc_HARP_SMARCAL1 RVT-GII Intron_maturas2 HNHc SF2_C_SNF Feature: gene Location: 33-161 bp Feature: gene Location: 369-2234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1461-1644 bp Feature: domain Description: GIIM Note: maturase Location: 1461-1644 bp Feature: gene Location: 2512-3378 bp Feature: domain Description: DEXDc_RapA Location: 2560-2665 bp Feature: domain Description: DEXDc_RapA Location: 2560-2665 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 3220-3352 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 3220-3352 bp Feature: gene Location: 3981-5816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4248-5076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4248-5076 bp Feature: domain Description: Intron_maturas2 Location: 5148-5520 bp Feature: domain Description: Intron_maturas2 Location: 5148-5520 bp Feature: domain Description: HNHc Note: nucleases Location: 5616-5763 bp Feature: domain Description: HNHc Note: nucleases Location: 5616-5763 bp Feature: gene Location: 5970-7472 bp Feature: domain Description: SF2_C_SNF Location: 6606-6864 bp Feature: domain Description: SF2_C_SNF Location: 6606-6864 bp Feature: gene Location: 7489-8202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DEXDc_RapA (cd18011), DEXHc_HARP_SMARCAL1 (cd18010), Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793)