myRT

myRT report for GCA_009646995.1_ASM964699v1

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Seq: WJDF01000569.1 Bacillus thuringiensis strain 4F3 NODE_1160_length_250_cov_2.439306, whole genome shotgun sequence (250 bp)
Overview 1 RT 1: 1-250 bp Neighborhood of RT #1 [1, 249] RVT-GII Feature: gene Location: 1-249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30-250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDF01000011.1 Bacillus thuringiensis strain 4F3 NODE_11_length_105059_cov_44.281162, whole genome shotgun sequence (105059 bp)
Overview 1 RT 1: 79604-85673 bp Neighborhood of RT #1 [79604, 86131] Bacillus_HBL RVT-GII GIIM Bacillus_HBL PRK04778 Bacillus_HBL Feature: gene Location: 79604-80923 bp Feature: domain Description: Bacillus_HBL Location: 79712-80222 bp Feature: domain Description: Bacillus_HBL Location: 79712 -802 2 2 bp Feature: gene Location: 80985-81170 bp Feature: gene Location: 81882-83759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82209-82902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 2 09-82 902 bp Feature: domain Description: GIIM Note: maturase Location: 83046-83175 bp Feature: domain Description: GIIM Note: maturase Location: 83046-83175 bp Feature: gene Location: 83870-84967 bp Feature: domain Description: Bacillus_HBL Location: 83894-84437 bp Feature: domain Description: Bacillus_HBL Location: 83894-84437 bp Feature: domain Description: PRK04778 Location: 84635-84950 bp Feature: domain Description: PRK04778 Location: 84635-84950 bp Feature: gene Location: 85004-86131 bp Feature: domain Description: Bacillus_HBL Location: 85142-85673 bp Feature: domain Description: Bacillus_HBL Location: 85142 -85673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bacillus_HBL (pfam05791), RVT-GII, GIIM (pfam08388), PRK04778 (septation ring formation regulator EzrA; Provisional)

Seq: WJDF01000180.1 Bacillus thuringiensis strain 4F3 NODE_180_length_5393_cov_66.868134, whole genome shotgun sequence (5393 bp)
Overview 1 RT 1: 125-5392 bp Neighborhood of RT #1 [125, 5392] RVT-GII GIIM Ftsk_gamma Ftsk_gamma Feature: gene Location: 125-508 bp Feature: gene Location: 1180-3054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480-2185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480-2185 bp Feature: domain Description: GIIM Note: maturase Location: 2299-2467 bp Feature: domain Description: GIIM Note: maturase Location: 2299-2467 bp Feature: gene Location: 3395-5053 bp Feature: domain Description: Ftsk_gamma Location: 4043-4223 bp Feature: domain Description: Ftsk_gamma Location: 4043 -4223 bp Feature: domain Description: Ftsk_gamma Location: 4376-4520 bp Feature: domain Description: Ftsk_gamma Location: 43 76-4520 bp Feature: gene Location: 5204-5392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDF01000211.1 Bacillus thuringiensis strain 4F3 NODE_212_length_2887_cov_302.773665, whole genome shotgun sequence (2887 bp)
Overview 1 RT 1: 1-1833 bp Neighborhood of RT #1 [1, 2798] RVT-GII Feature: gene Location: 1-267 bp Feature: gene Location: 777-2798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1098-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1098-1833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDF01000215.1 Bacillus thuringiensis strain 4F3 NODE_216_length_2683_cov_604.167306, whole genome shotgun sequence (2683 bp)
Overview 1 RT 1: 215-2449 bp Neighborhood of RT #1 [215, 2565] RVT-GII HNHc Feature: gene Location: 215-448 bp Feature: gene Location: 736-2565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1738 bp Feature: domain Description: HNHc Note: nucleases Location: 2317-2449 bp Feature: domain Description: HNHc Note: nucleases Location: 2317-2449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDF01000216.1 Bacillus thuringiensis strain 4F3 NODE_217_length_2681_cov_307.718510, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 95-2421 bp Neighborhood of RT #1 [95, 2421] RVT-GII HNHc Feature: gene Location: 95-1891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353-1058 bp Feature: domain Description: HNHc Note: nucleases Location: 1619-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 16 19-1754 bp Feature: gene Location: 2203-2421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDF01000219.1 Bacillus thuringiensis strain 4F3 NODE_220_length_2615_cov_108.621355, whole genome shotgun sequence (2615 bp)
Overview 1 RT 1: 104-1757 bp Neighborhood of RT #1 [104, 1873] RVT-GII HNHc Feature: gene Location: 104-1873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1058 bp Feature: domain Description: HNHc Note: nucleases Location: 1619-1757 bp Feature: domain Description: HNHc Note: nucleases Location: 1619-17 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDF01000220.1 Bacillus thuringiensis strain 4F3 NODE_221_length_2499_cov_219.809661, whole genome shotgun sequence (2499 bp)
Overview 1 RT 1: 117-1911 bp Neighborhood of RT #1 [117, 1940] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38 4-1215 bp Feature: domain Description: Intron_maturas2 Location: 1287-1605 bp Feature: domain Description: Intron_maturas2 Location: 128 7-1605 bp Feature: domain Description: HNHc Note: nucleases Location: 1758-1911 bp Feature: domain Description: HNHc Note: nucleases Location: 1758 -1911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDF01000222.1 Bacillus thuringiensis strain 4F3 NODE_223_length_2457_cov_81.568487, whole genome shotgun sequence (2457 bp)
Overview 1 RT 1: 588-2388 bp Neighborhood of RT #1 [588, 2411] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 588-2411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: domain Description: Intron_maturas2 Location: 1755-2094 bp Feature: domain Description: Intron_maturas2 Location: 1755-209 4 bp Feature: domain Description: HNHc Note: nucleases Location: 2232-2388 bp Feature: domain Description: HNHc Note: nucleases Location: 2232-2388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDF01000226.1 Bacillus thuringiensis strain 4F3 NODE_227_length_2228_cov_166.924221, whole genome shotgun sequence (2228 bp)
Overview 1 RT 1: 73-1738 bp Neighborhood of RT #1 [73, 1863] RVT-GII HNHc Feature: gene Location: 73-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-10 66 bp Feature: domain Description: HNHc Note: nucleases Location: 1606-1738 bp Feature: domain Description: HNHc Note: nucleases Location: 1606-1738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDF01000003.1 Bacillus thuringiensis strain 4F3 NODE_3_length_200499_cov_62.892497, whole genome shotgun sequence (200499 bp)
Overview 1 RT 1: 40749-47455 bp Neighborhood of RT #1 [40749, 47535] CynX FadR RVT-GII HNHc ETR_like Ntn_PVA Feature: gene Location: 40749-41939 bp Feature: domain Description: CynX Location: 40764-41910 bp Feature: domain Description: CynX Location: 40764-41910 bp Feature: gene Location: 42010-42747 bp Feature: domain Description: FadR Location: 42100-42733 bp Feature: domain Description: FadR Location: 42100-42733 bp Feature: gene Location: 42937-44706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43195-43891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43195-43891 bp Feature: domain Description: HNHc Note: nucleases Location: 44452-44590 bp Feature: domain Description: HNHc Note: nucleases Location: 44452-44590 bp Feature: gene Location: 45416-46399 bp Feature: domain Description: ETR_like Location: 45437-46373 bp Feature: domain Description: ETR_like Location: 45437-46373 bp Feature: gene Location: 46549-47535 bp Feature: domain Description: Ntn_PVA Location: 46555-47455 bp Feature: domain Description: Ntn_PVA Location: 46555-47455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CynX (TIGR00896), FadR (COG2186), RVT-GII, HNHc (smart00507), ETR_like (cd05282), Ntn_PVA (cd00542)

Seq: WJDF01000056.1 Bacillus thuringiensis strain 4F3 NODE_56_length_37093_cov_99.979414, whole genome shotgun sequence (37093 bp)
Overview 1 RT 1: 20647-27876 bp Neighborhood of RT #1 [20647, 27876] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 20647-21360 bp Feature: gene Location: 21377-23779 bp Feature: domain Description: KOG1000 Location: 22085-22301 bp Feature: domain Description: KOG1000 Location: 22085-22301 bp Feature: domain Description: KOG1000 Location: 22907-23237 bp Feature: domain Description: KOG1000 Location: 22907-23237 bp Feature: gene Location: 24057-25922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24357-25062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24357-25062 bp Feature: domain Description: GIIM Note: maturase Location: 25149-25332 bp Feature: domain Description: GIIM Note: maturase Location: 25149-25332 bp Feature: gene Location: 26669-27577 bp Feature: gene Location: 27649-27876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, GIIM (pfam08388)

Seq: WJDF01000075.1 Bacillus thuringiensis strain 4F3 NODE_75_length_25461_cov_103.184723, whole genome shotgun sequence (25461 bp)
Overview 1 RT 1: 19752-24807 bp Neighborhood of RT #1 [19752, 24890] PinE HNHc RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 19752-20555 bp Feature: domain Description: PinE Location: 19761-20250 bp Feature: domain Description: PinE Location: 19761-20250 bp Feature: gene Location: 20691-21065 bp Feature: domain Description: HNHc Note: nucleases Location: 20781-20949 bp Feature: domain Description: HNHc Note: nucleases Location: 20781-20949 bp Feature: gene Location: 21111-22541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21420-22155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21420-22155 bp Feature: domain Description: GIIM Note: maturase Location: 22224-22356 bp Feature: domain Description: GIIM Note: maturase Location: 22224-22356 bp Feature: gene Location: 23032-23442 bp Feature: gene Location: 23559-24890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23868-24507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23868-24507 bp Feature: domain Description: GIIM Note: maturase Location: 24582-24807 bp Feature: domain Description: GIIM Note: maturase Location: 24582-24807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), HNHc (smart00507), RVT-GII, GIIM (pfam08388)