myRT

myRT report for GCA_009647045.1_ASM964704v1

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Seq: WJDD01000116.1 Bacillus thuringiensis strain 4F5 NODE_117_length_4017_cov_231.796954, whole genome shotgun sequence (4017 bp)
Overview 1 RT 1: 3-3786 bp Neighborhood of RT #1 [3, 3911] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 3-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-429 bp Feature: domain Description: Intron_maturas2 Location: 501-819 bp Feature: domain Description: Intron_maturas2 Location: 501 -81 9 bp Feature: domain Description: HNHc Note: nucleases Location: 969-1125 bp Feature: domain Description: HNHc Note: nucleases Location: 969-1 1 25 bp Feature: gene Location: 1293-1439 bp Feature: gene Location: 2121-3911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2418-3114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 8-31 1 4 bp Feature: domain Description: HNHc Note: nucleases Location: 3654-3786 bp Feature: domain Description: HNHc Note: nucleases Location: 3654-3786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJDD01000138.1 Bacillus thuringiensis strain 4F5 NODE_139_length_2687_cov_301.104981, whole genome shotgun sequence (2687 bp)
Overview 1 RT 1: 117-2391 bp Neighborhood of RT #1 [117, 2391] RVT-GII HNHc Feature: gene Location: 117-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-112 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: gene Location: 2233-2391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDD01000139.1 Bacillus thuringiensis strain 4F5 NODE_140_length_2608_cov_442.849072, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 58-1054 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDD01000141.1 Bacillus thuringiensis strain 4F5 NODE_142_length_2528_cov_221.347205, whole genome shotgun sequence (2528 bp)
Overview 1 RT 1: 589-2389 bp Neighborhood of RT #1 [589, 2412] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 589-2412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: domain Description: Intron_maturas2 Location: 1756-2095 bp Feature: domain Description: Intron_maturas2 Location: 1756-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDD01000144.1 Bacillus thuringiensis strain 4F5 NODE_145_length_2259_cov_217.489001, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 665-1952 bp Neighborhood of RT #1 [665, 2257] RVT-GII GIIM Feature: gene Location: 665-2257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965 -1670 bp Feature: domain Description: GIIM Note: maturase Location: 1784-1952 bp Feature: domain Description: GIIM Note: maturase Location: 1784-195 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDD01000158.1 Bacillus thuringiensis strain 4F5 NODE_161_length_1290_cov_230.115416, whole genome shotgun sequence (1290 bp)
Overview 1 RT 1: 1-679 bp Neighborhood of RT #1 [1, 678] RVT-GII Feature: gene Location: 1-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271-6 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDD01000050.1 Bacillus thuringiensis strain 4F5 NODE_50_length_31605_cov_149.216601, whole genome shotgun sequence (31605 bp)
Overview 1 RT 1: 23404-31573 bp Neighborhood of RT #1 [23404, 31573] SF2_C_SNF RVT-GII Intron_maturas2 HNHc DEXDc_RapA DEXHc_HARP_SMARCAL1 RVT-GII GIIM Feature: gene Location: 23404-24117 bp Feature: gene Location: 24134-25636 bp Feature: domain Description: SF2_C_SNF Location: 24770-25028 bp Feature: domain Description: SF2_C_SNF Location: 247 7 0-25028 bp Feature: gene Location: 25790-27625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26057-26888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26057 -26888 bp Feature: domain Description: Intron_maturas2 Location: 26957-27329 bp Feature: domain Description: Intron_maturas2 Location: 26957 -27 329 bp Feature: domain Description: HNHc Note: nucleases Location: 27425-27572 bp Feature: domain Description: HNHc Note: nucleases Location: 27 425-27 57 2 bp Feature: gene Location: 28228-29094 bp Feature: domain Description: DEXDc_RapA Location: 28276-28381 bp Feature: domain Description: DEXDc_RapA Location: 2827 6-28381 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 28936-29068 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 28936-29068 bp Feature: gene Location: 29372-31237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29672-30377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2967 2-3037 7 bp Feature: domain Description: GIIM Note: maturase Location: 30464-30647 bp Feature: domain Description: GIIM Note: maturase Location: 30464-30647 bp Feature: gene Location: 31445-31573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SF2_C_SNF (cd18793), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEXDc_RapA (cd18011), DEXHc_HARP_SMARCAL1 (cd18010), GIIM (pfam08388)

Seq: WJDD01000089.1 Bacillus thuringiensis strain 4F5 NODE_89_length_10699_cov_149.641593, whole genome shotgun sequence (10699 bp)
Overview 1 RT 1: 5036-10696 bp Neighborhood of RT #1 [5036, 10696] RVT-GII HNHc LPD1 Feature: gene Location: 5036-6127 bp Feature: gene Location: 6456-6674 bp Feature: gene Location: 6848-8644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7142-7838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7142-78 38 bp Feature: domain Description: HNHc Note: nucleases Location: 8438-8513 bp Feature: domain Description: HNHc Note: nucleases Location: 8 438 -8 513 bp Feature: gene Location: 8716-9513 bp Feature: domain Description: LPD1 Location: 9262-9457 bp Feature: domain Description: LPD1 Location: 9262-9457 bp Feature: gene Location: 9503-10696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), LPD1 (pfam18796)