myRT

myRT report for GCA_009647135.1_ASM964713v1

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Seq: WJDK01000115.1 Bacillus thuringiensis strain 4D5 NODE_115_length_13970_cov_38.916289, whole genome shotgun sequence (13970 bp)
Overview 1 RT 1: 3-9107 bp Neighborhood of RT #1 [3, 9148] AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Feature: gene Location: 3-578 bp Feature: gene Location: 588-1013 bp Feature: gene Location: 1452-7091 bp Feature: domain Description: AE_Prim_S_like Location: 1662-1881 bp Feature: domain Description: AE_Prim_S_like Location: 1 662-1 881 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2868-3522 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 2868-3522 bp Feature: gene Location: 7367-7594 bp Feature: domain Description: PRK13922 Location: 7454-7574 bp Feature: domain Description: PRK1 3922 Location: 7454-7574 bp Feature: gene Location: 8057-9148 bp Feature: domain Description: RapH_N Location: 8078-8249 bp Feature: domain Description: RapH_N Location: 8078-8249 bp Feature: domain Description: TPR Location: 8384-8651 bp Feature: domain Description: TPR Location: 8384-8651 bp Feature: domain Description: TPR Location: 8696-9107 bp Feature: domain Description: TPR Location: 8696-91 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028)

Seq: WJDK01000164.1 Bacillus thuringiensis strain 4D5 NODE_164_length_5299_cov_134.770394, whole genome shotgun sequence (5299 bp)
Overview 1 RT 1: 107-4658 bp Neighborhood of RT #1 [107, 4687] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2579-2725 bp Feature: gene Location: 2864-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJDK01000195.1 Bacillus thuringiensis strain 4D5 NODE_196_length_2705_cov_121.348174, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 159-2311 bp Neighborhood of RT #1 [159, 2311] RVT-GII HNHc Feature: gene Location: 159-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 -1149 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: gene Location: 2129-2311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDK01000197.1 Bacillus thuringiensis strain 4D5 NODE_198_length_2680_cov_121.550134, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 94-2420 bp Neighborhood of RT #1 [94, 2420] RVT-GII HNHc Feature: gene Location: 94-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: gene Location: 2202-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDK01000200.1 Bacillus thuringiensis strain 4D5 NODE_201_length_2608_cov_271.415251, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 8-105 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615 -175 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDK01000202.1 Bacillus thuringiensis strain 4D5 NODE_203_length_2527_cov_144.575102, whole genome shotgun sequence (2527 bp)
Overview 1 RT 1: 588-2388 bp Neighborhood of RT #1 [588, 2411] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 588-2411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-16 86 bp Feature: domain Description: Intron_maturas2 Location: 1755-2094 bp Feature: domain Description: Intron_maturas2 Location: 1755-2094 bp Feature: domain Description: HNHc Note: nucleases Location: 2232-2388 bp Feature: domain Description: HNHc Note: nucleases Location: 2232-2388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDK01000208.1 Bacillus thuringiensis strain 4D5 NODE_209_length_2259_cov_125.358387, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 3-1290 bp Neighborhood of RT #1 [3, 1595] RVT-GII GIIM Feature: gene Location: 3-1595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-1008 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1290 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDK01000253.1 Bacillus thuringiensis strain 4D5 NODE_255_length_991_cov_657.037199, whole genome shotgun sequence (991 bp)
Overview 1 RT 1: 3-960 bp Neighborhood of RT #1 [3, 989] RVT-GII GIIM Feature: gene Location: 3-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-660 bp Feature: domain Description: GIIM Note: maturase Location: 735-960 bp Feature: domain Description: GIIM Note: maturase Location: 735-960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDK01000027.1 Bacillus thuringiensis strain 4D5 NODE_27_length_66274_cov_83.207003, whole genome shotgun sequence (66274 bp)
Overview 1 RT 1: 34836-42065 bp Neighborhood of RT #1 [34836, 42065] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 34836-35063 bp Feature: gene Location: 35135-36043 bp Feature: gene Location: 36790-38655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37090-37795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3709 0-3779 5 bp Feature: domain Description: GIIM Note: maturase Location: 37882-38065 bp Feature: domain Description: GIIM Note: maturase Location: 37882-38065 bp Feature: gene Location: 38933-41335 bp Feature: domain Description: KOG1000 Location: 39641-39857 bp Feature: domain Description: KOG1000 Location: 39 641-39 857 bp Feature: domain Description: KOG1000 Location: 40460-40793 bp Feature: domain Description: KOG1000 Location: 40460-4079 3 bp Feature: gene Location: 41352-42065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: WJDK01000379.1 Bacillus thuringiensis strain 4D5 NODE_429_length_332_cov_604.929412, whole genome shotgun sequence (332 bp)
Overview 1 RT 1: 1-331 bp Neighborhood of RT #1 [1, 330] RVT-GII Feature: gene Location: 1-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDK01000380.1 Bacillus thuringiensis strain 4D5 NODE_430_length_332_cov_34.054902, whole genome shotgun sequence (332 bp)
Overview 1 RT 1: 3-330 bp Neighborhood of RT #1 [3, 329] RVT-GII Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII