myRT

myRT report for GCA_009647175.1_ASM964717v1

Download annotations/find similar RTs

Seq: WJDM01000111.1 Bacillus thuringiensis strain 4D2 NODE_111_length_13970_cov_46.458216, whole genome shotgun sequence (13970 bp)
Overview 1 RT 1: 4823-13968 bp Neighborhood of RT #1 [4823, 13968] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Feature: gene Location: 4823-5914 bp Feature: domain Description: RapH_N Location: 4844-5015 bp Feature: domain Description: RapH_N Location: 4844-501 5 bp Feature: domain Description: TPR Location: 5150-5417 bp Feature: domain Description: TPR Location: 51 50-541 7 bp Feature: domain Description: TPR Location: 5462-5873 bp Feature: domain Description: TPR Location: 5462-5873 bp Feature: gene Location: 6377-6604 bp Feature: domain Description: PRK13922 Location: 6464-6584 bp Feature: domain Description: PRK1 3922 Location: 6464-6584 bp Feature: gene Location: 6880-12519 bp Feature: domain Description: AE_Prim_S_like Location: 7090-7309 bp Feature: domain Description: AE_Prim_S_like Location: 7090-7309 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8296-8950 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 8296-8950 bp Feature: gene Location: 12958-13383 bp Feature: gene Location: 13393-13968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10

Seq: WJDM01000159.1 Bacillus thuringiensis strain 4D2 NODE_159_length_5299_cov_148.584642, whole genome shotgun sequence (5299 bp)
Overview 1 RT 1: 613-5068 bp Neighborhood of RT #1 [613, 5193] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 613-2436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783-2 101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 54-2 407 bp Feature: gene Location: 2575-2721 bp Feature: gene Location: 3403-5193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDM01000187.1 Bacillus thuringiensis strain 4D2 NODE_187_length_2705_cov_150.875190, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 359-2416 bp Neighborhood of RT #1 [359, 2547] RVT-GII HNHc Feature: gene Location: 359-577 bp Feature: gene Location: 751-2547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1741 bp Feature: domain Description: HNHc Note: nucleases Location: 2341-2416 bp Feature: domain Description: HNHc Note: nucleases Location: 23 41-2416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDM01000190.1 Bacillus thuringiensis strain 4D2 NODE_190_length_2680_cov_147.237418, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 261-2450 bp Neighborhood of RT #1 [261, 2587] RVT-GII HNHc Feature: gene Location: 261-479 bp Feature: gene Location: 791-2587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 9-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-24 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDM01000193.1 Bacillus thuringiensis strain 4D2 NODE_193_length_2608_cov_319.830107, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 8-105 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615 -175 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDM01000194.1 Bacillus thuringiensis strain 4D2 NODE_194_length_2527_cov_167.707347, whole genome shotgun sequence (2527 bp)
Overview 1 RT 1: 117-1917 bp Neighborhood of RT #1 [117, 1940] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: Intron_maturas2 Location: 1284-16 23 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 176 1-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJDM01000200.1 Bacillus thuringiensis strain 4D2 NODE_201_length_2259_cov_144.241063, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 665-1952 bp Neighborhood of RT #1 [665, 2257] RVT-GII GIIM Feature: gene Location: 665-2257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-167 0 bp Feature: domain Description: GIIM Note: maturase Location: 1784-1952 bp Feature: domain Description: GIIM Note: maturase Location: 17 84-1952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDM01000249.1 Bacillus thuringiensis strain 4D2 NODE_253_length_964_cov_739.488162, whole genome shotgun sequence (964 bp)
Overview 1 RT 1: 3-933 bp Neighborhood of RT #1 [3, 962] RVT-GII GIIM Feature: gene Location: 3-962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-633 bp Feature: domain Description: GIIM Note: maturase Location: 708-933 bp Feature: domain Description: GIIM Note: maturase Location: 708 -933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJDM01000027.1 Bacillus thuringiensis strain 4D2 NODE_27_length_66157_cov_99.977936, whole genome shotgun sequence (66157 bp)
Overview 1 RT 1: 34836-42065 bp Neighborhood of RT #1 [34836, 42065] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 34836-35063 bp Feature: gene Location: 35135-36043 bp Feature: gene Location: 36790-38655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37090-37795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3709 0-3779 5 bp Feature: domain Description: GIIM Note: maturase Location: 37882-38065 bp Feature: domain Description: GIIM Note: maturase Location: 37882-38065 bp Feature: gene Location: 38933-41335 bp Feature: domain Description: KOG1000 Location: 39641-39857 bp Feature: domain Description: KOG1000 Location: 39 641-39 857 bp Feature: domain Description: KOG1000 Location: 40460-40793 bp Feature: domain Description: KOG1000 Location: 40460-4079 3 bp Feature: gene Location: 41352-42065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: WJDM01000352.1 Bacillus thuringiensis strain 4D2 NODE_382_length_359_cov_712.095745, whole genome shotgun sequence (359 bp)
Overview 1 RT 1: 1-358 bp Neighborhood of RT #1 [1, 357] RVT-GII Feature: gene Location: 1-357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDM01000353.1 Bacillus thuringiensis strain 4D2 NODE_383_length_359_cov_47.212766, whole genome shotgun sequence (359 bp)
Overview 1 RT 1: 1-358 bp Neighborhood of RT #1 [1, 357] RVT-GII Feature: gene Location: 1-357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDM01000445.1 Bacillus thuringiensis strain 4D2 NODE_834_length_252_cov_1.668571, whole genome shotgun sequence (252 bp)
Overview 1 RT 1: 3-174 bp Neighborhood of RT #1 [3, 251] RVT-GII Feature: gene Location: 3-251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDM01000455.1 Bacillus thuringiensis strain 4D2 NODE_897_length_247_cov_0.858824, whole genome shotgun sequence (247 bp)
Overview 1 RT 1: 3-246 bp Neighborhood of RT #1 [3, 245] RVT-GII Feature: gene Location: 3-245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII