myRT

myRT report for GCA_009647285.1_ASM964728v1

Download annotations/find similar RTs

Seq: WJDS01000383.1 Bacillus thuringiensis strain 4A10 NODE_1136_length_237_cov_3.193750, whole genome shotgun sequence (237 bp)
Overview 1 RT 1: 1-232 bp Neighborhood of RT #1 [1, 234] RVT-GII Feature: gene Location: 1-234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24-232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDS01000441.1 Bacillus thuringiensis strain 4A10 NODE_1329_length_228_cov_0.947020, whole genome shotgun sequence (228 bp)
Overview 1 RT 1: 3-180 bp Neighborhood of RT #1 [3, 227] RVT-GII Feature: gene Location: 3-227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1-180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDS01000001.1 Bacillus thuringiensis strain 4A10 NODE_1_length_809359_cov_58.074082, whole genome shotgun sequence (809359 bp)
Overview 1 RT 1: 741889-747974 bp Neighborhood of RT #1 [741889, 747979] PRK13922 PRK13927 RVT-GII HNHc PRK00024 PRK00148 Feature: gene Location: 741889-742740 bp Feature: domain Description: PRK13922 Location: 741892-742720 bp Feature: domain Description: PRK13 922 Location: 741892-742720 bp Feature: gene Location: 742782-743801 bp Feature: domain Description: PRK13927 Location: 742800-743790 bp Feature: domain Description: PRK13 927 Location: 742800-743 790 bp Feature: gene Location: 744123-745994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744444-745152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744444-745152 bp Feature: domain Description: HNHc Note: nucleases Location: 745746-745914 bp Feature: domain Description: HNHc Note: nucleases Location: 745746-745914 bp Feature: gene Location: 746695-747336 bp Feature: domain Description: PRK00024 Location: 746707-747322 bp Feature: domain Description: PRK00024 Location: 746707-7473 22 bp Feature: gene Location: 747383-747979 bp Feature: domain Description: PRK00148 Location: 747413-747974 bp Feature: domain Description: PRK00148 Location: 747413 -747974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC), PRK00148 (Maf-like protein; Reviewed)

Seq: WJDS01000022.1 Bacillus thuringiensis strain 4A10 NODE_22_length_99577_cov_60.341709, whole genome shotgun sequence (99577 bp)
Overview 1 RT 1: 23154-32509 bp Neighborhood of RT #1 [23154, 32509] CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 23154-27188 bp Feature: gene Location: 27185-28489 bp Feature: domain Description: CwlT_like Location: 28037-28478 bp Feature: domain Description: CwlT_like Location: 28037-284 78 bp Feature: gene Location: 29065-30888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29329-30163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29329-30163 bp Feature: domain Description: Intron_maturas2 Location: 30232-30571 bp Feature: domain Description: Intron_maturas2 Location: 30232-30571 bp Feature: domain Description: HNHc Note: nucleases Location: 30709-30865 bp Feature: domain Description: HNHc Note: nucleases Location: 30709-30865 bp Feature: gene Location: 31021-31917 bp Feature: domain Description: NlpD Location: 31078-31486 bp Feature: domain Description: NlpD Location: 31078-314 86 bp Feature: domain Description: Spr Location: 31522-31858 bp Feature: domain Description: Spr Location: 31522-31858 bp Feature: gene Location: 31934-32509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: WJDS01000042.1 Bacillus thuringiensis strain 4A10 NODE_42_length_31524_cov_59.530257, whole genome shotgun sequence (31524 bp)
Overview 1 RT 1: 1462-7007 bp Neighborhood of RT #1 [1462, 7007] RVT-Retrons Trypsin_2 NUMOD1 Feature: gene Location: 1462-2055 bp Feature: gene Location: 2387-3184 bp Feature: gene Location: 3562-5319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3718-4312 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3718-4312 bp Feature: domain Description: Trypsin_2 Location: 4729-5188 bp Feature: domain Description: Trypsin_2 Location: 4729-5 188 bp Feature: gene Location: 5721-6212 bp Feature: domain Description: NUMOD1 Location: 6060-6126 bp Feature: domain Description: NUMOD1 Location: 6060-6126 bp Feature: gene Location: 6840-7007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), NUMOD1 (pfam07453)

Seq: WJDS01000285.1 Bacillus thuringiensis strain 4A10 NODE_737_length_256_cov_0.748603, whole genome shotgun sequence (256 bp)
Overview 1 RT 1: 10-253 bp Neighborhood of RT #1 [10, 255] RVT-GII Feature: gene Location: 10-255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII