myRT

myRT report for GCA_009647315.1_ASM964731v1

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Seq: WJDT01000107.1 Bacillus thuringiensis strain 4A1 NODE_111_length_2681_cov_180.620584, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 116-2390 bp Neighborhood of RT #1 [116, 2390] RVT-GII HNHc Feature: gene Location: 116-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 6-1 1 21 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1 700-1 832 bp Feature: gene Location: 2232-2390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDT01000108.1 Bacillus thuringiensis strain 4A1 NODE_112_length_2681_cov_164.378648, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 95-2421 bp Neighborhood of RT #1 [95, 2421] RVT-GII HNHc Feature: gene Location: 95-1891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353-1058 bp Feature: domain Description: HNHc Note: nucleases Location: 1619-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 1619-1754 bp Feature: gene Location: 2203-2421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDT01000110.1 Bacillus thuringiensis strain 4A1 NODE_114_length_2607_cov_189.535968, whole genome shotgun sequence (2607 bp)
Overview 1 RT 1: 99-1752 bp Neighborhood of RT #1 [99, 1868] RVT-GII HNHc Feature: gene Location: 99-1868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357-1053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 57-1053 bp Feature: domain Description: HNHc Note: nucleases Location: 1614-1752 bp Feature: domain Description: HNHc Note: nucleases Location: 1614-1752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WJDT01000170.1 Bacillus thuringiensis strain 4A1 NODE_207_length_421_cov_0.898256, whole genome shotgun sequence (421 bp)
Overview 1 RT 1: 1-127 bp Neighborhood of RT #1 [1, 270] RVT-GII Feature: gene Location: 1-270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJDT01000034.1 Bacillus thuringiensis strain 4A1 NODE_34_length_51502_cov_82.530948, whole genome shotgun sequence (51502 bp)
Overview 1 RT 1: 1043-10709 bp Neighborhood of RT #1 [1043, 10709] TrbL TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 1043-4969 bp Feature: domain Description: TrbL Location: 1334-1820 bp Feature: domain Description: TrbL Location: 1334-1820 bp Feature: gene Location: 5000-5968 bp Feature: domain Description: TraC-F-type Location: 5027-5807 bp Feature: domain Description: TraC-F-type Location: 5 027-5 807 bp Feature: gene Location: 6260-8092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6560-7265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65 60-7265 bp Feature: domain Description: HNHc Note: nucleases Location: 7844-7976 bp Feature: domain Description: HNHc Note: nucleases Location: 7844-7976 bp Feature: gene Location: 8821-9792 bp Feature: domain Description: TraC-F-type Location: 9241-9715 bp Feature: domain Description: TraC-F-type Location: 9241-9715 bp Feature: gene Location: 9795-10709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: WJDT01000053.1 Bacillus thuringiensis strain 4A1 NODE_53_length_30704_cov_80.969504, whole genome shotgun sequence (30704 bp)
Overview 1 RT 1: 27034-30642 bp Neighborhood of RT #1 [27034, 30653] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like Feature: gene Location: 27034-27903 bp Feature: domain Description: NlpD Location: 27049-27475 bp Feature: domain Description: NlpD Location: 27049-27475 bp Feature: domain Description: Spr Location: 27508-27844 bp Feature: domain Description: Spr Location: 27508-27844 bp Feature: gene Location: 27927-28061 bp Feature: gene Location: 28063-29886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28327-29161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28327-2916 1 bp Feature: domain Description: Intron_maturas2 Location: 29230-29569 bp Feature: domain Description: Intron_maturas2 Location: 29230-2956 9 bp Feature: domain Description: HNHc Note: nucleases Location: 29707-29863 bp Feature: domain Description: HNHc Note: nucleases Location: 29707-2986 3 bp Feature: gene Location: 30462-30653 bp Feature: domain Description: CwlT_like Location: 30489-30642 bp Feature: domain Description: CwlT_like Location: 30489-306 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like

Seq: WJDT01000055.1 Bacillus thuringiensis strain 4A1 NODE_55_length_25869_cov_83.351117, whole genome shotgun sequence (25869 bp)
Overview 1 RT 1: 7849-18357 bp Neighborhood of RT #1 [7849, 18357] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 7849-8832 bp Feature: domain Description: rpsA Location: 8116-8653 bp Feature: domain Description: rpsA Location: 8116-8653 bp Feature: gene Location: 9091-10857 bp Feature: domain Description: TraG-D_C Location: 9103-9421 bp Feature: domain Description: TraG-D_C Location: 9103-9421 bp Feature: domain Description: Ftsk_gamma Location: 9847-10027 bp Feature: domain Description: Ftsk_gamma Location: 9847 -10027 bp Feature: domain Description: Ftsk_gamma Location: 10180-10324 bp Feature: domain Description: Ftsk_gamma Location: 10180-10324 bp Feature: gene Location: 11090-12964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11390-12095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11390-12095 bp Feature: domain Description: GIIM Note: maturase Location: 12209-12377 bp Feature: domain Description: GIIM Note: maturase Location: 12209-1237 7 bp Feature: domain Description: HNHc Note: nucleases Location: 12725-12890 bp Feature: domain Description: HNHc Note: nucleases Location: 127 25-12890 bp Feature: gene Location: 13637-14158 bp Feature: gene Location: 14297-16120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14567-15395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14567 -15395 bp Feature: domain Description: Intron_maturas2 Location: 15467-15785 bp Feature: domain Description: Intron_maturas2 Location: 15467 -157 85 bp Feature: domain Description: HNHc Note: nucleases Location: 15938-16091 bp Feature: domain Description: HNHc Note: nucleases Location: 15938-16091 bp Feature: gene Location: 16721-17866 bp Feature: gene Location: 17884-18357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: WJDT01000057.1 Bacillus thuringiensis strain 4A1 NODE_57_length_25552_cov_79.390618, whole genome shotgun sequence (25552 bp)
Overview 1 RT 1: 9689-14671 bp Neighborhood of RT #1 [9689, 14916] CzcO DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 9689-11116 bp Feature: domain Description: CzcO Location: 9791-10796 bp Feature: domain Description: CzcO Location: 9791-10796 bp Feature: gene Location: 11466-11879 bp Feature: domain Description: DDE_Tnp_1 Location: 11502-11604 bp Feature: domain Description: DDE_Tnp_1 Location: 11502-11604 bp Feature: gene Location: 11996-13327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12305-12944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12305-12944 bp Feature: domain Description: GIIM Note: maturase Location: 13019-13244 bp Feature: domain Description: GIIM Note: maturase Location: 13019-13244 bp Feature: gene Location: 13477-13656 bp Feature: gene Location: 13786-14916 bp Feature: domain Description: DDE_Tnp_1 Location: 14203-14671 bp Feature: domain Description: DDE_Tnp_1 Location: 14203-14671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CzcO (COG2072), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)