myRT

myRT report for GCA_009647615.1_ASM964761v1

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Seq: WJFE01000001.1 Laceyella tengchongensis strain BKK01 NODE_1_length_164659_cov_122.771974, whole genome shotgun sequence (164659 bp)
Overview 1 RT 1: 132470-136227 bp Neighborhood of RT #1 [132470, 136227] nucleoid_noc BcsQ RVT-GII KOG4768 Feature: gene Location: 132470-133327 bp Feature: domain Description: nucleoid_noc Location: 132542-133178 bp Feature: domain Description: nucleoid_noc Location: 1 32542-1 331 78 bp Feature: gene Location: 133320-134024 bp Feature: domain Description: BcsQ Location: 133323-134010 bp Feature: domain Description: BcsQ Location: 1 33323-1 3401 0 bp Feature: gene Location: 134094-135455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134373-134907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 34373-1 34907 bp Feature: domain Description: KOG4768 Location: 135072-135294 bp Feature: domain Description: KOG4768 Location: 1 35072-1 35294 bp Feature: gene Location: 135712-135873 bp Feature: gene Location: 136033-136227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nucleoid_noc (TIGR04285), BcsQ (COG1192), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: WJFE01000042.1 Laceyella tengchongensis strain BKK01 NODE_42_length_25985_cov_100.387042, whole genome shotgun sequence (25985 bp)
Overview 1 RT 1: 11241-16481 bp Neighborhood of RT #1 [11241, 16516] rrmA RVT-GII PRK11886 PRK13299 Feature: gene Location: 11241-11780 bp Feature: gene Location: 11953-12843 bp Feature: domain Description: rrmA Location: 12016-12823 bp Feature: domain Description: rrmA Location: 12 016-12 82 3 bp Feature: gene Location: 13092-14150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13317-13938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13317-13938 bp Feature: gene Location: 14326-15312 bp Feature: domain Description: PRK11886 Location: 14356-15298 bp Feature: domain Description: PRK11886 Location: 14356-152 98 bp Feature: gene Location: 15290-16516 bp Feature: domain Description: PRK13299 Location: 15299-16481 bp Feature: domain Description: PRK132 99 Location: 152 99-16481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rrmA (PRK11088), RVT-GII, PRK11886 (bifunctional biotin-- ligase/biotin operon repressor BirA), PRK13299 (tRNA CCA-pyrophosphorylase; Provisional)

Seq: WJFE01000007.1 Laceyella tengchongensis strain BKK01 NODE_7_length_54533_cov_102.704358, whole genome shotgun sequence (54533 bp)
Overview 1 RT 1: 36320-39519 bp Neighborhood of RT #1 [36320, 39519] AmiC Intron_maturas2 RVT-GII Feature: gene Location: 36320-36997 bp Feature: domain Description: AmiC Location: 36368-36836 bp Feature: domain Description: AmiC Location: 3 63 68-3 683 6 bp Feature: gene Location: 37168-37632 bp Feature: domain Description: Intron_maturas2 Location: 37204-37498 bp Feature: domain Description: Intron_maturas2 Location: 3 7204-3 7498 bp Feature: gene Location: 37671-38582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37932-38562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 793 2-3 8562 bp Feature: gene Location: 38873-39094 bp Feature: gene Location: 39307-39519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmiC (COG0860), Intron_maturas2 (pfam01348), RVT-GII

Seq: WJFE01000098.1 Laceyella tengchongensis strain BKK01 NODE_98_length_12241_cov_105.326194, whole genome shotgun sequence (12241 bp)
Overview 1 RT 1: 3474-10067 bp Neighborhood of RT #1 [3474, 10087] HEAT HEAT_2 RVT-Retrons ADPRase_NUDT5 Feature: gene Location: 3474-6035 bp Feature: domain Description: HEAT Location: 4539-4773 bp Feature: domain Description: HEAT Location: 4 539-4 773 bp Feature: domain Description: HEAT_2 Location: 5313-5553 bp Feature: domain Description: HEAT_2 Location: 5313-5553 bp Feature: gene Location: 6058-7692 bp Feature: gene Location: 7713-9167 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8274-8892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8274 -8892 bp Feature: gene Location: 9188-9400 bp Feature: gene Location: 9542-10087 bp Feature: domain Description: ADPRase_NUDT5 Location: 9668-10067 bp Feature: domain Description: ADPRase_NUDT5 Location: 9668-10067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), HEAT_2 (pfam13646), RVT-Retrons, ADPRase_NUDT5 (cd03424)