myRT

myRT report for GCA_009649095.1_ASM964909v1

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Seq: WJNE01000012.1 Lactobacillus reuteri strain Rat19 NODE_12_length_69801_cov_101.900092, whole genome shotgun sequence (69801 bp)
Overview 1 RT 1: 66553-69800 bp Neighborhood of RT #1 [66553, 69799] GanA RVT-GII Feature: gene Location: 66553-68571 bp Feature: domain Description: GanA Location: 66559-68521 bp Feature: domain Description: GanA Location: 66559-68521 bp Feature: gene Location: 68634-68855 bp Feature: gene Location: 69059-69799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69377-69800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69377-69800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GanA (COG1874), RVT-GII

Seq: WJNE01000015.1 Lactobacillus reuteri strain Rat19 NODE_15_length_49968_cov_135.338256, whole genome shotgun sequence (49968 bp)
Overview 1 RT 1: 46371-49964 bp Neighborhood of RT #1 [46371, 49966] ProC ALDH_SSADH1_GabD1 RVT-GII Feature: gene Location: 46371-47234 bp Feature: domain Description: ProC Location: 46434-47220 bp Feature: domain Description: ProC Location: 46434-472 2 0 bp Feature: gene Location: 47484-48857 bp Feature: domain Description: ALDH_SSADH1_GabD1 Location: 47562-48843 bp Feature: domain Description: ALDH_SSADH1_GabD1 Location: 47562 -48843 bp Feature: gene Location: 49364-49966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49682-49964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49682 -49964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ProC (COG0345), ALDH_SSADH1_GabD1 (cd07100), RVT-GII

Seq: WJNE01000016.1 Lactobacillus reuteri strain Rat19 NODE_16_length_49521_cov_123.844232, whole genome shotgun sequence (49521 bp)
Overview 1 RT 1: 3-1411 bp 2 RT 2: 47056-49520 bp Neighborhood of RT #1 [3, 1413] RVT-GII GIIM rpsJ Neighborhood of RT #2 [47056, 49519] rve PRX_Atyp2cys RVT-GII Feature: gene Location: 3-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-210 bp Feature: domain Description: GIIM Note: maturase Location: 264-492 bp Feature: domain Description: GIIM Note: maturase Location: 264-492 bp Feature: gene Location: 954-1088 bp Feature: gene Location: 1105-1413 bp Feature: domain Description: rpsJ Location: 1108-1411 bp Feature: domain Description: rpsJ Location: 1108-1411 bp Feature: gene Location: 47056-47382 bp Feature: domain Description: rve Location: 47059-47248 bp Feature: domain Description: rve Location: 47059-47248 bp Feature: gene Location: 47797-48291 bp Feature: domain Description: PRX_Atyp2cys Location: 47854-48271 bp Feature: domain Description: PRX_Atyp2cys Location: 47854-48271 bp Feature: gene Location: 48779-49519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49097-49520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49097-49520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsJ (PRK00596), RVT-GII, GIIM (pfam08388), rve (pfam00665), PRX_Atyp2cys (cd03014)

Seq: WJNE01000061.1 Lactobacillus reuteri strain Rat19 NODE_61_length_704_cov_455.577123, whole genome shotgun sequence (704 bp)
Overview 1 RT 1: 49-538 bp Neighborhood of RT #1 [49, 702] RVT-GII GIIM Feature: gene Location: 49-702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55-256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55-256 bp Feature: domain Description: GIIM Note: maturase Location: 310-538 bp Feature: domain Description: GIIM Note: maturase Location: 310-538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJNE01000063.1 Lactobacillus reuteri strain Rat19 NODE_63_length_696_cov_458.629174, whole genome shotgun sequence (696 bp)
Overview 1 RT 1: 3-564 bp Neighborhood of RT #1 [3, 695] RVT-GII GIIM Feature: gene Location: 3-695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-282 bp Feature: domain Description: GIIM Note: maturase Location: 336-564 bp Feature: domain Description: GIIM Note: maturase Location: 336-5 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJNE01000091.1 Lactobacillus reuteri strain Rat19 NODE_91_length_255_cov_1129.453125, whole genome shotgun sequence (255 bp)
Overview 1 RT 1: 2-251 bp Neighborhood of RT #1 [2, 253] RVT-GII Feature: gene Location: 2-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII