myRT

myRT report for GCA_009649305.1_ASM964930v1

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Seq: WJRE01000002.1 Escherichia coli strain MDRO_M_Bern_073-ESBL NODE_2_length_405560_cov_117.479127, whole genome shotgun sequence (405560 bp)
Overview 1 RT 1: 403709-405556 bp Neighborhood of RT #1 [403709, 405558] InsE PHA02517 RVT-GII Feature: gene Location: 403709-404011 bp Feature: domain Description: InsE Location: 403718-404000 bp Feature: domain Description: InsE Location: 40371 8-404000 bp Feature: gene Location: 404038-404463 bp Feature: domain Description: PHA02517 Location: 404062-404398 bp Feature: domain Description: PHA0251 7 Location: 404062-404398 bp Feature: gene Location: 405055-405558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405328-405556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405328-405556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: WJRE01000040.1 Escherichia coli strain MDRO_M_Bern_073-ESBL NODE_40_length_18875_cov_112.610810, whole genome shotgun sequence (18875 bp)
Overview 1 RT 1: 5944-11671 bp Neighborhood of RT #1 [5944, 11913] YeeP RVT-UG1 GerD Feature: gene Location: 5944-6129 bp Feature: gene Location: 6306-7178 bp Feature: domain Description: YeeP Location: 6309-7176 bp Feature: domain Description: YeeP Location: 6309-7176 bp Feature: gene Location: 7782-10253 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8394-8904 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8394-8904 bp Feature: gene Location: 10355-11470 bp Feature: gene Location: 11479-11913 bp Feature: domain Description: GerD Location: 11557-11671 bp Feature: domain Description: GerD Location: 11557-11671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: WJRE01000046.1 Escherichia coli strain MDRO_M_Bern_073-ESBL NODE_46_length_11504_cov_160.285027, whole genome shotgun sequence (11504 bp)
Overview 1 RT 1: 1-1027 bp Neighborhood of RT #1 [1, 1035] RVT-GII PRK10173 PRK10173 Feature: gene Location: 1-252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-94 bp Feature: gene Location: 291-602 bp Feature: domain Description: PRK10173 Location: 294-513 bp Feature: domain Description: PRK10173 Location: 294-513 bp Feature: gene Location: 586-1035 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Feature: domain Description: PRK10173 Location: 589-1027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: WJRE01000069.1 Escherichia coli strain MDRO_M_Bern_073-ESBL NODE_69_length_963_cov_407.545147, whole genome shotgun sequence (963 bp)
Overview 1 RT 1: 1-850 bp Neighborhood of RT #1 [1, 960] RVT-GII GIIM Feature: gene Location: 1-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0-577 bp Feature: domain Description: GIIM Note: maturase Location: 652-850 bp Feature: domain Description: GIIM Note: maturase Location: 652-850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)