myRT

myRT report for GCA_009649445.1_ASM964944v1

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Seq: WJMY01000012.1 Lactobacillus reuteri strain L1600-1 NODE_12_length_53652_cov_88.875890, whole genome shotgun sequence (53652 bp)
Overview 1 RT 1: 21640-26357 bp Neighborhood of RT #1 [21640, 26357] RmlD_sub_bind RVT-AbiP2 DDE_Tnp_IS66 Feature: gene Location: 21640-22485 bp Feature: domain Description: RmlD_sub_bind Location: 21649-22474 bp Feature: domain Description: RmlD_sub_bind Location: 21 649-22474 bp Feature: gene Location: 22624-23796 bp Feature: gene Location: 23850-25376 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 24282-24741 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 24282-24741 bp Feature: gene Location: 25714-25971 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25717-25939 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2571 7-25939 bp Feature: gene Location: 26217-26357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RmlD_sub_bind (pfam04321), RVT-AbiP2, DDE_Tnp_IS66 (pfam03050)

Seq: WJMY01000015.1 Lactobacillus reuteri strain L1600-1 NODE_15_length_50514_cov_140.512176, whole genome shotgun sequence (50514 bp)
Overview 1 RT 1: 8287-13008 bp Neighborhood of RT #1 [8287, 13040] YfcA RVT-GII GIIM 3beta-17beta-HSD_like_SDR_c nuc_hydro_CaPnhB Feature: gene Location: 8287-9072 bp Feature: domain Description: YfcA Location: 8299-9067 bp Feature: domain Description: YfcA Location: 82 99-9067 bp Feature: gene Location: 9139-9360 bp Feature: gene Location: 9564-10946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9882-10500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9882 -10500 bp Feature: domain Description: GIIM Note: maturase Location: 10554-10782 bp Feature: domain Description: GIIM Note: maturase Location: 10554-10782 bp Feature: gene Location: 11031-11786 bp Feature: domain Description: 3beta-17beta-HSD_like_SDR_c Location: 11040-11784 bp Feature: domain Description: 3beta-17beta-HSD_like_SDR_c Location: 11040-11784 bp Feature: gene Location: 12078-13040 bp Feature: domain Description: nuc_hydro_CaPnhB Location: 12093-13008 bp Feature: domain Description: nuc_hydro_CaPnhB Location: 12 093-13008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfcA (COG0730), RVT-GII, GIIM (pfam08388), 3beta-17beta-HSD_like_SDR_c (cd05341), nuc_hydro_CaPnhB (cd02650)

Seq: WJMY01000026.1 Lactobacillus reuteri strain L1600-1 NODE_26_length_24371_cov_113.994143, whole genome shotgun sequence (24371 bp)
Overview 1 RT 1: 2-3327 bp Neighborhood of RT #1 [2, 3329] RVT-GII GIIM DHAK_reg TetR_C_8 P-type_ATPase_HM Feature: gene Location: 2-142 bp Feature: gene Location: 147-1319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255-873 bp Feature: domain Description: GIIM Note: maturase Location: 927-1155 bp Feature: domain Description: GIIM Note: maturase Location: 927-1155 bp Feature: gene Location: 1526-2146 bp Feature: domain Description: DHAK_reg Location: 1544-1712 bp Feature: domain Description: DHAK_reg Location: 1544-1712 bp Feature: domain Description: TetR_C_8 Location: 1811-2069 bp Feature: domain Description: TetR_C_8 Location: 1811-2069 bp Feature: gene Location: 2283-3329 bp Feature: domain Description: P-type_ATPase_HM Location: 2346-3327 bp Feature: domain Description: P-type_ATPase_HM Location: 23 46-3 3 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DHAK_reg (TIGR02366), TetR_C_8 (pfam14278), P-type_ATPase_HM (cd07553)

Seq: WJMY01000056.1 Lactobacillus reuteri strain L1600-1 NODE_56_length_608_cov_3520.993763, whole genome shotgun sequence (608 bp)
Overview 1 RT 1: 2-602 bp Neighborhood of RT #1 [2, 607] RVT-GII Feature: gene Location: 2-607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254-602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254 -602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJMY01000076.1 Lactobacillus reuteri strain L1600-1 NODE_76_length_255_cov_2721.070312, whole genome shotgun sequence (255 bp)
Overview 1 RT 1: 2-155 bp Neighborhood of RT #1 [2, 253] RVT-GII Feature: gene Location: 2-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -15 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJMY01000078.1 Lactobacillus reuteri strain L1600-1 NODE_78_length_243_cov_242.034483, whole genome shotgun sequence (243 bp)
Overview 1 RT 1: 2-242 bp Neighborhood of RT #1 [2, 241] RVT-GII Feature: gene Location: 2-241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJMY01000080.1 Lactobacillus reuteri strain L1600-1 NODE_80_length_207_cov_88.487500, whole genome shotgun sequence (207 bp)
Overview 1 RT 1: 3-108 bp Neighborhood of RT #1 [3, 206] RVT-GII Feature: gene Location: 3-206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-108 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII