myRT

myRT report for GCA_009649475.1_ASM964947v1

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Seq: WJNC01000033.1 Lactobacillus reuteri strain N2J NODE_33_length_6371_cov_109.232543, whole genome shotgun sequence (6371 bp)
Overview 1 RT 1: 2-1420 bp Neighborhood of RT #1 [2, 1458] RVT-GII INT_C_like_3 Feature: gene Location: 2-658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-566 bp Feature: gene Location: 705-869 bp Feature: gene Location: 964-1458 bp Feature: domain Description: INT_C_like_3 Location: 1078-1420 bp Feature: domain Description: INT_C_like_3 Location: 1 078-1 420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_C_like_3 (cd01192)

Seq: WJNC01000003.1 Lactobacillus reuteri strain N2J NODE_3_length_163006_cov_113.438602, whole genome shotgun sequence (163006 bp)
Overview 1 RT 1: 35076-40284 bp Neighborhood of RT #1 [35076, 40286] TIR_2 COG2865 RVT-GII group_II_RT_mat guaA Feature: gene Location: 35076-35954 bp Feature: domain Description: TIR_2 Location: 35103-35448 bp Feature: domain Description: TIR_2 Location: 35103-35448 bp Feature: gene Location: 35967-37493 bp Feature: domain Description: COG2865 Location: 35976-37449 bp Feature: domain Description: COG2 865 Location: 35976-37449 bp Feature: gene Location: 37759-38043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37765-37987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37765-37987 bp Feature: gene Location: 38050-38274 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 38062-38266 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 38062 -382 66 bp Feature: gene Location: 38670-40286 bp Feature: domain Description: guaA Location: 38763-40284 bp Feature: domain Description: guaA Location: 38763-402 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-GII, group_II_RT_mat (TIGR04416), guaA (PRK00074)

Seq: WJNC01000044.1 Lactobacillus reuteri strain N2J NODE_44_length_1478_cov_248.699482, whole genome shotgun sequence (1478 bp)
Overview 1 RT 1: 449-1385 bp Neighborhood of RT #1 [449, 1477] RVT-GII Feature: gene Location: 449-1477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-13 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJNC01000004.1 Lactobacillus reuteri strain N2J NODE_4_length_161529_cov_121.680933, whole genome shotgun sequence (161529 bp)
Overview 1 RT 1: 86098-91524 bp Neighborhood of RT #1 [86098, 91529] PRK07275 rpsR RVT-GII GIIM GdpP rplI Feature: gene Location: 86098-86661 bp Feature: domain Description: PRK07275 Location: 86101-86518 bp Feature: domain Description: PRK07275 Location: 86101-86518 bp Feature: gene Location: 86695-86931 bp Feature: domain Description: rpsR Location: 86701-86923 bp Feature: domain Description: rpsR Location: 86701-86923 bp Feature: gene Location: 87028-88410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87346-87964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8734 6-87964 bp Feature: domain Description: GIIM Note: maturase Location: 88018-88246 bp Feature: domain Description: GIIM Note: maturase Location: 88018-8824 6 bp Feature: gene Location: 89053-91071 bp Feature: domain Description: GdpP Location: 89110-91051 bp Feature: domain Description: GdpP Location: 89110-91051 bp Feature: gene Location: 91077-91529 bp Feature: domain Description: rplI Location: 91080-91524 bp Feature: domain Description: rplI Location: 91080-91524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), rpsR (PRK00391), RVT-GII, GIIM (pfam08388), GdpP (COG3887), rplI (PRK00137)