myRT

myRT report for GCA_009649565.1_ASM964956v1

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Seq: WJNA01000002.1 Lactobacillus reuteri strain Lr4020 NODE_2_length_143164_cov_67.362612, whole genome shotgun sequence (143164 bp)
Overview 1 RT 1: 135855-142792 bp Neighborhood of RT #1 [135855, 142792] nifR3_yhdG lysS RVT-GII GIIM Arylsulfotran_2 Feature: gene Location: 135855-136856 bp Feature: domain Description: nifR3_yhdG Location: 135870-136821 bp Feature: domain Description: nifR3_yhdG Location: 1 35870-1 36821 bp Feature: gene Location: 136877-138400 bp Feature: domain Description: lysS Location: 136895-138359 bp Feature: domain Description: lysS Location: 1 36895-1 38359 bp Feature: gene Location: 139043-140425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139361-139979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39361 -1 39979 bp Feature: domain Description: GIIM Note: maturase Location: 140033-140261 bp Feature: domain Description: GIIM Note: maturase Location: 1 40033-1 40261 bp Feature: gene Location: 140528-141940 bp Feature: domain Description: Arylsulfotran_2 Location: 141002-141719 bp Feature: domain Description: Arylsulfotran_2 Location: 1 41 002-1 41 71 9 bp Feature: gene Location: 142652-142792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nifR3_yhdG (TIGR00737), lysS (PRK02983), RVT-GII, GIIM (pfam08388), Arylsulfotran_2 (pfam14269)

Seq: WJNA01000036.1 Lactobacillus reuteri strain Lr4020 NODE_36_length_14813_cov_59.760793, whole genome shotgun sequence (14813 bp)
Overview 1 RT 1: 8199-13408 bp Neighborhood of RT #1 [8199, 13422] RmlD_sub_bind PRA1 RVT-UG2 RVT-UG2 TM2 zinc_ribbon_2 Feature: gene Location: 8199-9044 bp Feature: domain Description: RmlD_sub_bind Location: 8208-9033 bp Feature: domain Description: RmlD_sub_bind Location: 82 08-9033 bp Feature: gene Location: 9119-9886 bp Feature: domain Description: PRA1 Location: 9158-9458 bp Feature: domain Description: PRA1 Location: 9158-9458 bp Feature: gene Location: 10332-10769 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10536-10767 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10536-10767 bp Feature: gene Location: 10786-11829 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10789-11377 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10789-11377 bp Feature: gene Location: 12114-12743 bp Feature: gene Location: 12868-13422 bp Feature: domain Description: TM2 Location: 12946-13102 bp Feature: domain Description: TM2 Location: 12 946-13102 bp Feature: domain Description: zinc_ribbon_2 Location: 13342-13408 bp Feature: domain Description: zinc_ribbon_2 Location: 13342 -13408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RmlD_sub_bind (pfam04321), PRA1 (pfam03208), RVT-UG2, TM2 (pfam05154), zinc_ribbon_2 (pfam13240)

Seq: WJNA01000055.1 Lactobacillus reuteri strain Lr4020 NODE_55_length_997_cov_70.666667, whole genome shotgun sequence (997 bp)
Overview 1 RT 1: 1-859 bp Neighborhood of RT #1 [1, 996] RVT-GII GIIM Feature: gene Location: 1-996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-577 bp Feature: domain Description: GIIM Note: maturase Location: 631-859 bp Feature: domain Description: GIIM Note: maturase Location: 63 1-859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJNA01000069.1 Lactobacillus reuteri strain Lr4020 NODE_69_length_510_cov_49.295039, whole genome shotgun sequence (510 bp)
Overview 1 RT 1: 138-501 bp Neighborhood of RT #1 [138, 509] RVT-GII Feature: gene Location: 138-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144-501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 4 -501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJNA01000072.1 Lactobacillus reuteri strain Lr4020 NODE_72_length_481_cov_110.149718, whole genome shotgun sequence (481 bp)
Overview 1 RT 1: 1-481 bp Neighborhood of RT #1 [1, 480] RVT-GII Feature: gene Location: 1-480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII