myRT

myRT report for GCA_009649645.1_ASM964964v1

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Seq: WJMV01000114.1 Lactobacillus reuteri strain 6799jm-1 NODE_115_length_296_cov_130.177515, whole genome shotgun sequence (296 bp)
Overview 1 RT 1: 1-295 bp Neighborhood of RT #1 [1, 294] RVT-GII Feature: gene Location: 1-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WJMV01000001.1 Lactobacillus reuteri strain 6799jm-1 NODE_1_length_154234_cov_145.712946, whole genome shotgun sequence (154234 bp)
Overview 1 RT 1: 3-2224 bp 2 RT 2: 108843-113640 bp Neighborhood of RT #1 [3, 2224] RVT-GII GIIM galactose_mutarotase_like Neighborhood of RT #2 [108843, 113708] TrmA PRX_Atyp2cys RVT-GII GIIM DHAK_reg TetR_C_8 Feature: gene Location: 3-767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-32 1 bp Feature: domain Description: GIIM Note: maturase Location: 375-603 bp Feature: domain Description: GIIM Note: maturase Location: 375-603 bp Feature: gene Location: 869-1906 bp Feature: domain Description: galactose_mutarotase_like Location: 923-1895 bp Feature: domain Description: galactose_mutarotase_like Location: 92 3-1895 bp Feature: gene Location: 2024-2224 bp Feature: gene Location: 108843-110282 bp Feature: domain Description: TrmA Location: 108933-110253 bp Feature: domain Description: TrmA Location: 108933-1102 53 bp Feature: gene Location: 110518-111012 bp Feature: domain Description: PRX_Atyp2cys Location: 110575-110992 bp Feature: domain Description: PRX_Atyp2 cys Location: 110575-110992 bp Feature: gene Location: 111500-112882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111818-112436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111818-112 436 bp Feature: domain Description: GIIM Note: maturase Location: 112490-112718 bp Feature: domain Description: GIIM Note: maturase Location: 112 490-112 718 bp Feature: gene Location: 113089-113361 bp Feature: domain Description: DHAK_reg Location: 113107-113275 bp Feature: domain Description: DHAK_reg Location: 113107-1132 75 bp Feature: gene Location: 113352-113708 bp Feature: domain Description: TetR_C_8 Location: 113373-113640 bp Feature: domain Description: TetR_C_8 Location: 113373-113640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), galactose_mutarotase_like (cd09019), TrmA (COG2265), PRX_Atyp2cys (cd03014), DHAK_reg (TIGR02366), TetR_C_8 (pfam14278)

Seq: WJMV01000028.1 Lactobacillus reuteri strain 6799jm-1 NODE_28_length_32194_cov_116.175632, whole genome shotgun sequence (32194 bp)
Overview 1 RT 1: 127-4536 bp Neighborhood of RT #1 [127, 4601] PhdYeFM_antitox RVT-AbiK HEPN_RiboL-PSP Feature: gene Location: 127-264 bp Feature: domain Description: PhdYeFM_antitox Location: 136-262 bp Feature: domain Description: PhdYeFM_antitox Location: 13 6-262 bp Feature: gene Location: 741-2675 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1293-1686 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1293 -1686 bp Feature: gene Location: 2761-3522 bp Feature: gene Location: 3849-4601 bp Feature: domain Description: HEPN_RiboL-PSP Location: 4065-4536 bp Feature: domain Description: HEPN_RiboL-PSP Location: 4065-453 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RVT-AbiK, HEPN_RiboL-PSP (pfam18735)

Seq: WJMV01000037.1 Lactobacillus reuteri strain 6799jm-1 NODE_37_length_25200_cov_155.104495, whole genome shotgun sequence (25200 bp)
Overview 1 RT 1: 176-4493 bp Neighborhood of RT #1 [176, 4495] COG2865 RVT-GII group_II_RT_mat guaA Feature: gene Location: 176-1702 bp Feature: domain Description: COG2865 Location: 185-1658 bp Feature: domain Description: COG2865 Location: 185-1658 bp Feature: gene Location: 1968-2252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974-2193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974 -2193 bp Feature: gene Location: 2259-2483 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2271-2475 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2271-24 75 bp Feature: gene Location: 2879-4495 bp Feature: domain Description: guaA Location: 2972-4493 bp Feature: domain Description: guaA Location: 2972-4 4 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-GII, group_II_RT_mat (TIGR04416), guaA (PRK00074)

Seq: WJMV01000058.1 Lactobacillus reuteri strain 6799jm-1 NODE_58_length_3329_cov_301.469706, whole genome shotgun sequence (3329 bp)
Overview 1 RT 1: 3-3163 bp Neighborhood of RT #1 [3, 3327] Arylsulfotran_2 RVT-GII GIIM Feature: gene Location: 3-134 bp Feature: gene Location: 820-2232 bp Feature: domain Description: Arylsulfotran_2 Location: 1291-2011 bp Feature: domain Description: Arylsulfotran_2 Location: 1291-2011 bp Feature: gene Location: 2332-3327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2338-2881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2338-2881 bp Feature: domain Description: GIIM Note: maturase Location: 2935-3163 bp Feature: domain Description: GIIM Note: maturase Location: 2935 -3163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arylsulfotran_2 (pfam14269), RVT-GII, GIIM (pfam08388)

Seq: WJMV01000065.1 Lactobacillus reuteri strain 6799jm-1 NODE_65_length_1874_cov_543.589010, whole genome shotgun sequence (1874 bp)
Overview 1 RT 1: 90-1873 bp Neighborhood of RT #1 [90, 1873] RVT-GII GIIM Feature: gene Location: 90-1469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1026 bp Feature: domain Description: GIIM Note: maturase Location: 1080-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1080-1308 bp Feature: gene Location: 1667-1873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WJMV01000078.1 Lactobacillus reuteri strain 6799jm-1 NODE_78_length_723_cov_1230.063758, whole genome shotgun sequence (723 bp)
Overview 1 RT 1: 3-510 bp Neighborhood of RT #1 [3, 512] RVT-GII Feature: gene Location: 3-512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII