myRT

myRT report for GCA_009649815.1_ASM964981v1

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Seq: WJIC01000013.1 Nocardia sp. SYP-A9097 NODE_13, whole genome shotgun sequence (205364 bp)
Overview 1 RT 1: 161564-166258 bp Neighborhood of RT #1 [161564, 166290] RVT-GII GIIM 3alpha_HSD_SDR_c Feature: gene Location: 161564-162094 bp Feature: gene Location: 162624-162905 bp Feature: gene Location: 163532-164956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163790-164492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 63790-1 64492 bp Feature: domain Description: GIIM Note: maturase Location: 164564-164795 bp Feature: domain Description: GIIM Note: maturase Location: 1 64564-1 64795 bp Feature: gene Location: 165107-165346 bp Feature: gene Location: 165499-166290 bp Feature: domain Description: 3alpha_HSD_SDR_c Location: 165535-166258 bp Feature: domain Description: 3alpha_HSD_SDR_c Location: 1 65535-1 66258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), 3alpha_HSD_SDR_c (cd05328)

Seq: WJIC01000055.1 Nocardia sp. SYP-A9097 NODE_55, whole genome shotgun sequence (24248 bp)
Overview 1 RT 1: 13308-19238 bp Neighborhood of RT #1 [13308, 19267] HTH_Tnp_4 DDE_Tnp_4 PHA02517 RVT-GII MFS_1 STKc_PknB_like COG3903 TPR_12 TPR_12 HTH_LUXR Feature: gene Location: 13308-14081 bp Feature: domain Description: HTH_Tnp_4 Location: 13410-13563 bp Feature: domain Description: HTH_Tnp_4 Location: 13410-13563 bp Feature: domain Description: DDE_Tnp_4 Location: 13620-14055 bp Feature: domain Description: DDE_Tnp_4 Location: 1362 0-14055 bp Feature: gene Location: 14285-14554 bp Feature: domain Description: PHA02517 Location: 14306-14534 bp Feature: domain Description: PHA02 517 Location: 14306-14534 bp Feature: gene Location: 14773-15150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14863-15130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14863-15130 bp Feature: gene Location: 15378-15647 bp Feature: domain Description: MFS_1 Location: 15384-15537 bp Feature: domain Description: MFS_1 Location: 15384-15537 bp Feature: gene Location: 15986-19267 bp Feature: domain Description: STKc_PknB_like Location: 16076-16832 bp Feature: domain Description: STKc_PknB_like Location: 16076-16832 bp Feature: domain Description: COG3903 Location: 17036-18278 bp Feature: domain Description: COG3903 Location: 17036-182 78 bp Feature: domain Description: TPR_12 Location: 18461-18638 bp Feature: domain Description: TPR_12 Location: 18461-18638 bp Feature: domain Description: TPR_12 Location: 18668-18842 bp Feature: domain Description: TPR_12 Location: 18668-18842 bp Feature: domain Description: HTH_LUXR Location: 19076-19238 bp Feature: domain Description: HTH_LUXR Location: 19076-192 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, MFS_1 (pfam07690), STKc_PknB_like (cd14014), COG3903 (Predicted ATPase ), TPR_12 (pfam13424), HTH_LUXR (smart00421)