myRT

myRT report for GCA_009649845.1_ASM964984v1

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Seq: WJIE01000012.1 Polyangium spumosum strain DSM 14734 Scaffold12, whole genome shotgun sequence (227913 bp)
Overview 1 RT 1: 62042-71272 bp Neighborhood of RT #1 [62042, 71272] YkuD_like RVT-Retrons SWIM Feature: gene Location: 62042-63538 bp Feature: gene Location: 63836-65308 bp Feature: domain Description: YkuD_like Location: 64880-65231 bp Feature: domain Description: YkuD_like Location: 64880-65231 bp Feature: gene Location: 65426-67108 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66230-66881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66230-66881 bp Feature: gene Location: 67461-69569 bp Feature: domain Description: SWIM Location: 69060-69153 bp Feature: domain Description: SWIM Location: 69060-691 53 bp Feature: gene Location: 69566-71272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkuD_like (cl21614), RVT-Retrons, SWIM (pfam04434)

Seq: WJIE01000006.1 Polyangium spumosum strain DSM 14734 Scaffold6, whole genome shotgun sequence (821605 bp)
Overview 1 RT 1: 55529-63142 bp Neighborhood of RT #1 [55529, 63306] CsdA RVT-Retrons Transposase_31 YadD HEAT_2 HEAT HEAT_2 HEAT_2 Aldo_ket_red Feature: gene Location: 55529-56743 bp Feature: domain Description: CsdA Location: 55595-56729 bp Feature: domain Description: CsdA Location: 55595-5672 9 bp Feature: gene Location: 56753-57265 bp Feature: gene Location: 57283-58725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57904-58495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57904-58495 bp Feature: gene Location: 58802-59902 bp Feature: domain Description: Transposase_31 Location: 58814-59429 bp Feature: domain Description: Transposase_31 Location: 58814-5942 9 bp Feature: domain Description: YadD Location: 59579-59762 bp Feature: domain Description: YadD Location: 59579-59762 bp Feature: gene Location: 60400-63306 bp Feature: domain Description: HEAT_2 Location: 60517-60769 bp Feature: domain Description: HEAT_2 Location: 60517-60769 bp Feature: domain Description: HEAT Location: 60796-60877 bp Feature: domain Description: HEAT Location: 60796-60877 bp Feature: domain Description: HEAT_2 Location: 61435-61654 bp Feature: domain Description: HEAT_2 Location: 61435-61654 bp Feature: domain Description: HEAT_2 Location: 61960-62188 bp Feature: domain Description: HEAT_2 Location: 61960-62 188 bp Feature: domain Description: Aldo_ket_red Location: 62428-63142 bp Feature: domain Description: Aldo_ket_red Location: 62 42 8-63142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsdA (COG0520), RVT-Retrons, Transposase_31 (pfam04754), YadD (COG5464), HEAT_2 (pfam13646), HEAT (sd00044), Aldo_ket_red (pfam00248)