myRT

myRT report for GCA_009650455.1_ASM965045v1

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Seq: VTDC01000007.1 Pseudomonas aeruginosa strain 2596 NODE_7_length_289488_cov_20.776370, whole genome shotgun sequence (289488 bp)
Overview 1 RT 1: 83935-94605 bp Neighborhood of RT #1 [83935, 94670] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 83935-85788 bp Feature: domain Description: PRK05658 Location: 83947-85786 bp Feature: domain Description: PRK05658 Location: 83947-85786 bp Feature: gene Location: 85895-89632 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 86003-86660 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 86003-86660 bp Feature: domain Description: PRK09776 Location: 86873-87344 bp Feature: domain Description: PRK09776 Location: 86873-87344 bp Feature: domain Description: PAS Location: 87389-87926 bp Feature: domain Description: PAS Location: 87389-87926 bp Feature: domain Description: PRK10060 Location: 87935-89582 bp Feature: domain Description: PRK1 0060 Location: 87935-89582 bp Feature: gene Location: 90713-92398 bp Feature: RT Description: RVT_N Location: 90770-91010 bp Feature: RT Description: RVT_N Location: 90770-91 01 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91058-91694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 058-91 694 bp Feature: domain Description: GIIM Note: maturase Location: 91748-91979 bp Feature: domain Description: GIIM Note: maturase Location: 91 748-91 979 bp Feature: domain Description: HNH Note: nucleases Location: 92231-92369 bp Feature: domain Description: HNH Note: nucleases Location: 92231 -92369 bp Feature: gene Location: 93121-94242 bp Feature: domain Description: COG3177 Location: 93139-94231 bp Feature: domain Description: COG31 77 Location: 931 39-94231 bp Feature: gene Location: 94335-94670 bp Feature: domain Description: NERD Location: 94434-94605 bp Feature: domain Description: NERD Location: 94434-94605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )
NERD (pfam08378)