myRT

myRT report for GCA_009661315.1_ASM966131v1

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Seq: WJVS01000001.1 Klebsiella pneumoniae strain CriePir185 NODE_1_length_488238_cov_23.102432, whole genome shotgun sequence (488238 bp)
Overview 1 RT 1: 5853-10736 bp Neighborhood of RT #1 [5853, 10738] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 5853-7118 bp Feature: domain Description: umuC Location: 5856-7116 bp Feature: domain Description: umuC Location: 5856-71 1 6 bp Feature: gene Location: 7343-7531 bp Feature: gene Location: 7791-8699 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8064-8520 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 8064-8520 bp Feature: gene Location: 8900-9568 bp Feature: domain Description: PRK09951 Location: 8903-9566 bp Feature: domain Description: PRK09951 Location: 8903-9566 bp Feature: gene Location: 9773-10738 bp Feature: domain Description: PRK15110 Location: 9776-10736 bp Feature: domain Description: PRK1 51 1 0 Location: 9776-1 0736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: WJVS01000042.1 Klebsiella pneumoniae strain CriePir185 NODE_42_length_8780_cov_41.458454, whole genome shotgun sequence (8780 bp)
Overview 1 RT 1: 4883-8622 bp Neighborhood of RT #1 [4883, 8648] N6_acetyl_AAC6 RVT-GII GIIM DHFR_1 Feature: gene Location: 4883-5116 bp Feature: gene Location: 5204-5758 bp Feature: domain Description: N6_acetyl_AAC6 Location: 5207-5756 bp Feature: domain Description: N6_acetyl_AAC6 Location: 52 07-5756 bp Feature: gene Location: 6479-7732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6671-7295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6671-72 95 bp Feature: domain Description: GIIM Note: maturase Location: 7334-7553 bp Feature: domain Description: GIIM Note: maturase Location: 7334-7553 bp Feature: gene Location: 8151-8648 bp Feature: domain Description: DHFR_1 Location: 8175-8622 bp Feature: domain Description: DHFR_1 Location: 8175-862 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), DHFR_1 (pfam00186)

Seq: WJVS01000044.1 Klebsiella pneumoniae strain CriePir185 NODE_44_length_6867_cov_21.568398, whole genome shotgun sequence (6867 bp)
Overview 1 RT 1: 3059-6865 bp Neighborhood of RT #1 [3059, 6864] DDE_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 3059-3586 bp Feature: gene Location: 3949-4452 bp Feature: domain Description: DDE_Tnp_IS1 Location: 4060-4450 bp Feature: domain Description: DDE_Tnp_IS1 Location: 4060-4450 bp Feature: gene Location: 4798-6285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5203-5893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5203 -5893 bp Feature: gene Location: 6291-6458 bp Feature: gene Location: 6691-6864 bp Feature: domain Description: PRK10276 Location: 6739-6865 bp Feature: domain Description: PRK10276 Location: 673 9-6865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)