myRT

myRT report for GCA_009661515.1_ASM966151v1

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Seq: WJVY01000037.1 Klebsiella pneumoniae strain CriePir142 NODE_37_length_8584_cov_78.420244, whole genome shotgun sequence (8584 bp)
Overview 1 RT 1: 126-2461 bp Neighborhood of RT #1 [126, 2461] RVT-Retrons HTH_XRE Feature: gene Location: 126-320 bp Feature: gene Location: 319-750 bp Feature: gene Location: 889-1839 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1069-1612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 069-1 61 2 bp Feature: gene Location: 1817-2137 bp Feature: domain Description: HTH_XRE Location: 1841-2006 bp Feature: domain Description: HTH_XRE Location: 1 841 -2006 bp Feature: gene Location: 2162-2461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)

Seq: WJVY01000003.1 Klebsiella pneumoniae strain CriePir142 NODE_3_length_474188_cov_65.876406, whole genome shotgun sequence (474188 bp)
Overview 1 RT 1: 219585-224468 bp Neighborhood of RT #1 [219585, 224470] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 219585-220850 bp Feature: domain Description: umuC Location: 219588-220848 bp Feature: domain Description: umuC Location: 2 19588-2 2 0848 bp Feature: gene Location: 221075-221263 bp Feature: gene Location: 221523-222431 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221796-222252 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 2 1796-2 2 2 2 52 bp Feature: gene Location: 222632-223300 bp Feature: domain Description: PRK09951 Location: 222635-223298 bp Feature: domain Description: PRK09951 Location: 2 2 2 635-2 2 32 98 bp Feature: gene Location: 223505-224470 bp Feature: domain Description: PRK15110 Location: 223508-224468 bp Feature: domain Description: PRK15110 Location: 2 2 3508-2 2 4468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)