myRT

myRT report for GCA_009663175.1_ASM966317v1

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Seq: VKJM01000003.1 Streptococcus suis strain CBNU VDC 13151 NODE_3_length_159698_cov_23.6408, whole genome shotgun sequence (159698 bp)
Overview 1 RT 1: 138547-148716 bp Neighborhood of RT #1 [138547, 148716] HepA RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 138547-138846 bp Feature: gene Location: 138917-140260 bp Feature: domain Description: HepA Location: 139151-139484 bp Feature: domain Description: HepA Location: 1 391 51 -1 39484 bp Feature: gene Location: 140398-142176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 140659-141451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 40659-1 41 451 bp Feature: domain Description: Intron_maturas2 Location: 141550-141787 bp Feature: domain Description: Intron_maturas2 Location: 1 41 550-1 41 787 bp Feature: domain Description: HNHc Note: nucleases Location: 141952-142138 bp Feature: domain Description: HNHc Note: nucleases Location: 1 41 952-1 421 38 bp Feature: gene Location: 142674-148136 bp Feature: domain Description: N6_Mtase Location: 144687-145278 bp Feature: domain Description: N6_Mtase Location: 1 44687-1 45278 bp Feature: domain Description: COG4646 Location: 145872-147993 bp Feature: domain Description: COG4646 Location: 1 45872-1 47993 bp Feature: gene Location: 148186-148716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HepA (COG0553), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: VKJM01000048.1 Streptococcus suis strain CBNU VDC 13151 NODE_48_length_2312_cov_105.112, whole genome shotgun sequence (2312 bp)
Overview 1 RT 1: 520-1861 bp Neighborhood of RT #1 [520, 2226] RVT_N RVT-GII GIIM Feature: gene Location: 520-2226 bp Feature: RT Description: RVT_N Location: 625-865 bp Feature: RT Description: RVT_N Location: 62 5-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1573 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Feature: domain Description: GIIM Note: maturase Location: 1642 -1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VKJM01000009.1 Streptococcus suis strain CBNU VDC 13151 NODE_9_length_67167_cov_23.1025, whole genome shotgun sequence (67167 bp)
Overview 1 RT 1: 61065-64326 bp Neighborhood of RT #1 [61065, 64326] RVT-GII TraG-D_C Feature: gene Location: 61065-61196 bp Feature: gene Location: 61202-61366 bp Feature: gene Location: 61513-63423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61822-62578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61822-62578 bp Feature: gene Location: 63434-64066 bp Feature: domain Description: TraG-D_C Location: 63527-63854 bp Feature: domain Description: TraG-D_C Location: 63 527-63 854 bp Feature: gene Location: 64084-64326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraG-D_C (pfam12696)