myRT

myRT report for GCA_009668145.1_ASM966814v1

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Seq: WJYE01000005.1 Enterobacteriaceae bacterium RIT711, whole genome shotgun sequence (283515 bp)
Overview 1 RT 1: 167213-171880 bp Neighborhood of RT #1 [167213, 171882] PRK14702 COG3436 RVT-GII GIIM PRK10554 Feature: gene Location: 167213-167830 bp Feature: domain Description: PRK14702 Location: 167216-167819 bp Feature: domain Description: PRK1 4702 Location: 1 6721 6-1 6781 9 bp Feature: gene Location: 167884-168450 bp Feature: domain Description: COG3436 Location: 167947-168400 bp Feature: domain Description: COG3436 Location: 1 67947-1 68400 bp Feature: gene Location: 168924-170168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169137-169794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 691 37-1 69794 bp Feature: domain Description: GIIM Note: maturase Location: 169875-170094 bp Feature: domain Description: GIIM Note: maturase Location: 1 69875-1 70094 bp Feature: gene Location: 170373-170588 bp Feature: gene Location: 170746-171882 bp Feature: domain Description: PRK10554 Location: 170791-171880 bp Feature: domain Description: PRK1 0554 Location: 1 70791 -1 71 880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14702 (insertion element IS2 transposase InsD; Provisional), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), PRK10554 (outer membrane porin protein C; Provisional)

Seq: WJYE01000050.1 Enterobacteriaceae bacterium RIT711, whole genome shotgun sequence (4748 bp)
Overview 1 RT 1: 2258-4623 bp Neighborhood of RT #1 [2258, 4745] DDE_Tnp_IS66 RVT-GII GIIM YvrE Feature: gene Location: 2258-2485 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2267-2450 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 67-2 450 bp Feature: gene Location: 2706-2855 bp Feature: gene Location: 2948-4120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3149-3803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3149-3803 bp Feature: domain Description: GIIM Note: maturase Location: 3881-4085 bp Feature: domain Description: GIIM Note: maturase Location: 3881-4085 bp Feature: gene Location: 4257-4745 bp Feature: domain Description: YvrE Location: 4323-4623 bp Feature: domain Description: YvrE Location: 432 3-462 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), YvrE (COG3386)

Seq: WJYE01000065.1 Enterobacteriaceae bacterium RIT711, whole genome shotgun sequence (2413 bp)
Overview 1 RT 1: 121-2224 bp Neighborhood of RT #1 [121, 2224] RVT-GII matK HNHc Feature: gene Location: 121-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-1177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 82-1177 bp Feature: domain Description: matK Location: 1324-1525 bp Feature: domain Description: matK Location: 13 24-1525 bp Feature: domain Description: HNHc Note: nucleases Location: 1723-1873 bp Feature: domain Description: HNHc Note: nucleases Location: 1723 -1873 bp Feature: gene Location: 1868-2224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, matK (CHL00002), HNHc (smart00507)