myRT

myRT report for GCA_009671225.1_ASM967122v1

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Seq: VUJG01000002.1 Salmonella enterica subsp. enterica serovar Kentucky strain 159847 contig02, whole genome shotgun sequence (790548 bp)
Overview 1 RT 1: 223827-230680 bp 2 RT 2: 701624-704893 bp Neighborhood of RT #1 [223827, 230682] 5 RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [701624, 704904] TIR-like RVT-Retrons InsE Feature: gene Location: 223827-224372 bp Feature: gene Location: 224375-226075 bp Feature: domain Description: 5 Location: 225599-225893 bp Feature: domain Description: 5 Location: 225599-225893 bp Feature: gene Location: 226982-227746 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 227105-227558 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2271 05-227558 bp Feature: gene Location: 228070-228576 bp Feature: domain Description: PRK10201 Location: 228073-228571 bp Feature: domain Description: PRK1 0201 Location: 228073-228571 bp Feature: gene Location: 228700-230682 bp Feature: domain Description: PRK05658 Location: 228838-230680 bp Feature: domain Description: PRK05658 Location: 228838-230680 bp Feature: gene Location: 701624-701998 bp Feature: gene Location: 702064-702924 bp Feature: domain Description: TIR-like Location: 702490-702844 bp Feature: domain Description: TIR-like Location: 702490-702844 bp Feature: gene Location: 702953-703912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 703133-703655 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7031 33-703655 bp Feature: gene Location: 703943-704170 bp Feature: gene Location: 704602-704904 bp Feature: domain Description: InsE Location: 704611-704893 bp Feature: domain Description: InsE Location: 70461 1 -704893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)