myRT

myRT report for GCA_009671285.1_ASM967128v1

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Seq: VFEW01000120.1 Pseudomonas gessardii strain DSM 17152 120_1923_599.941, whole genome shotgun sequence (1923 bp)
Overview 1 RT 1: 431-1673 bp Neighborhood of RT #1 [431, 1852] RVT-GII GIIM Feature: gene Location: 431-1852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-1403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788-1 403 bp Feature: domain Description: GIIM Note: maturase Location: 1460-1673 bp Feature: domain Description: GIIM Note: maturase Location: 1 460-1 673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VFEW01000028.1 Pseudomonas gessardii strain DSM 17152 28_73074_33.9092, whole genome shotgun sequence (73074 bp)
Overview 1 RT 1: 68117-72770 bp Neighborhood of RT #1 [68117, 72856] RVT-GII PRK09413 PRK14702 RVT_N RVT-GII DDE_Tnp_IS66_C nitrilase Feature: gene Location: 68117-68551 bp Feature: gene Location: 68515-68757 bp Feature: gene Location: 68815-69090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68995-69061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68995-69061 bp Feature: gene Location: 69141-69494 bp Feature: domain Description: PRK09413 Location: 69180-69492 bp Feature: domain Description: PRK09413 Location: 69180-69492 bp Feature: gene Location: 69614-70354 bp Feature: domain Description: PRK14702 Location: 69620-70337 bp Feature: domain Description: PRK14702 Location: 6962 0-70337 bp Feature: gene Location: 71264-71410 bp Feature: domain Description: RVT_N Location: 71273-71402 bp Feature: domain Description: RVT_N Location: 712 73-71402 bp Feature: gene Location: 71487-71669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71490-71667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71490-71667 bp Feature: gene Location: 71708-71914 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 71714-71801 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 71714-71801 bp Feature: gene Location: 72011-72856 bp Feature: domain Description: nitrilase Location: 72041-72770 bp Feature: domain Description: nitrilase Location: 72 041-72 770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09413 (IS2 repressor TnpA; Reviewed), PRK14702 (insertion element IS2 transposase InsD; Provisional), RVT_N (pfam13655), DDE_Tnp_IS66_C (pfam13817), nitrilase (cl11424)

Seq: VFEW01000037.1 Pseudomonas gessardii strain DSM 17152 37_59494_40.8052, whole genome shotgun sequence (59494 bp)
Overview 1 RT 1: 50075-56347 bp Neighborhood of RT #1 [50075, 56355] YqiC TIGR00368 RVT-UG8 PHA02517 InsE Feature: gene Location: 50075-50335 bp Feature: domain Description: YqiC Location: 50084-50324 bp Feature: domain Description: YqiC Location: 50084-503 24 bp Feature: gene Location: 50559-51578 bp Feature: domain Description: TIGR00368 Location: 50577-51471 bp Feature: domain Description: TIGR003 68 Location: 50577-51471 bp Feature: gene Location: 52945-54936 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 53470-53908 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 53 470-53 908 bp Feature: gene Location: 55220-56059 bp Feature: domain Description: PHA02517 Location: 55271-56051 bp Feature: domain Description: PHA02517 Location: 55271-56051 bp Feature: gene Location: 56071-56355 bp Feature: domain Description: InsE Location: 56083-56347 bp Feature: domain Description: InsE Location: 56083 -563 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqiC (COG2960), TIGR00368 (Mg chelatase-related protein), RVT-UG8, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: VFEW01000095.1 Pseudomonas gessardii strain DSM 17152 95_4995_71.2225, whole genome shotgun sequence (4995 bp)
Overview 1 RT 1: 2-4047 bp Neighborhood of RT #1 [2, 4047] RVT-GII GIIM PitA Feature: gene Location: 2-208 bp Feature: gene Location: 578-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-14 51 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1730 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1730 bp Feature: gene Location: 2028-3503 bp Feature: domain Description: PitA Location: 2070-3489 bp Feature: domain Description: PitA Location: 2070-34 89 bp Feature: gene Location: 3763-4047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PitA (COG0306)