myRT

myRT report for GCA_009674715.1_ASM967471v1

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Seq: WKJE01000135.1 Klebsiella pneumoniae strain DMC-19b NODE_128_length_1895_cov_99.106335, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 62-1894 bp Neighborhood of RT #1 [62, 1894] RVT-GII Feature: gene Location: 62-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1 1 57 bp Feature: gene Location: 1703-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WKJE01000108.1 Klebsiella pneumoniae strain DMC-19b NODE_67_length_22256_cov_28.943152, whole genome shotgun sequence (22256 bp)
Overview 1 RT 1: 12395-16488 bp Neighborhood of RT #1 [12395, 16553] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 12395-13471 bp Feature: domain Description: COG3547 Location: 12434-13355 bp Feature: domain Description: COG3547 Location: 12 434-13355 bp Feature: gene Location: 13720-13926 bp Feature: gene Location: 14013-15536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14286-15018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 86-15018 bp Feature: domain Description: GIIM Note: maturase Location: 15093-15291 bp Feature: domain Description: GIIM Note: maturase Location: 15093-152 91 bp Feature: gene Location: 15490-15915 bp Feature: gene Location: 16128-16553 bp Feature: domain Description: PHA02517 Location: 16152-16488 bp Feature: domain Description: PHA02 517 Location: 16152 -16488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WKJE01000109.1 Klebsiella pneumoniae strain DMC-19b NODE_68_length_21010_cov_49.872097, whole genome shotgun sequence (21010 bp)
Overview 1 RT 1: 2889-7087 bp Neighborhood of RT #1 [2889, 7089] RVT_N RVT-GII GIIM HNHc DUF1380 Antirestrict Feature: gene Location: 2889-3146 bp Feature: gene Location: 3177-3452 bp Feature: gene Location: 4026-5693 bp Feature: RT Description: RVT_N Location: 4074-4311 bp Feature: RT Description: RVT_N Location: 4074-43 11 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4362-5004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 62-5004 bp Feature: domain Description: GIIM Note: maturase Location: 5055-5289 bp Feature: domain Description: GIIM Note: maturase Location: 5055-5289 bp Feature: domain Description: HNHc Note: nucleases Location: 5499-5658 bp Feature: domain Description: HNHc Note: nucleases Location: 5499-5658 bp Feature: gene Location: 6195-6617 bp Feature: domain Description: DUF1380 Location: 6198-6495 bp Feature: domain Description: DUF13 80 Location: 6198-6495 bp Feature: gene Location: 6664-7089 bp Feature: domain Description: Antirestrict Location: 6799-7087 bp Feature: domain Description: Antirestrict Location: 6799-7087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128), Antirestrict (pfam03230)

Seq: WKJE01000026.1 Klebsiella pneumoniae strain DMC-19b NODE_7_length_174891_cov_56.379094, whole genome shotgun sequence (174891 bp)
Overview 1 RT 1: 89920-96373 bp Neighborhood of RT #1 [89920, 96373] Nuc_deoxyrib_tr RVT-Retrons AAA_21 Feature: gene Location: 89920-90171 bp Feature: gene Location: 90201-91037 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 90690-90861 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 90690-90861 bp Feature: gene Location: 91693-92793 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91876-92404 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91876-924 04 bp Feature: gene Location: 92908-94668 bp Feature: domain Description: AAA_21 Location: 93214-93436 bp Feature: domain Description: AAA_21 Location: 93214 -934 36 bp Feature: gene Location: 96068-96373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_21 (pfam13304)