myRT

myRT report for GCA_009677055.1_ASM967705v1

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Seq: WKLN01000106.1 Parabacteroides goldsteinii strain BIOML-A6 scaffold106_size2419, whole genome shotgun sequence (2419 bp)
Overview 1 RT 1: 309-1920 bp Neighborhood of RT #1 [309, 2321] RVT_N RVT-GII GIIM Feature: gene Location: 309-461 bp Feature: gene Location: 639-2321 bp Feature: RT Description: RVT_N Location: 693-936 bp Feature: RT Description: RVT_N Location: 693-936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-1635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981 -1 635 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1920 bp Feature: domain Description: GIIM Note: maturase Location: 1 689-1 920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKLN01000028.1 Parabacteroides goldsteinii strain BIOML-A6 scaffold28_size95869, whole genome shotgun sequence (95869 bp)
Overview 1 RT 1: 15121-20053 bp Neighborhood of RT #1 [15121, 20316] YWFCY RVT_N RVT-GII GIIM TraG-D_C DUF4326 Feature: gene Location: 15121-16044 bp Feature: domain Description: YWFCY Location: 15127-15304 bp Feature: domain Description: YWFCY Location: 1512 7-15304 bp Feature: gene Location: 16382-16516 bp Feature: gene Location: 16682-18334 bp Feature: RT Description: RVT_N Location: 16736-16979 bp Feature: RT Description: RVT_N Location: 16736-16979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17024-17672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702 4-17672 bp Feature: domain Description: GIIM Note: maturase Location: 17726-17957 bp Feature: domain Description: GIIM Note: maturase Location: 1772 6-17957 bp Feature: gene Location: 18339-19565 bp Feature: domain Description: TraG-D_C Location: 18921-19254 bp Feature: domain Description: TraG-D_C Location: 1892 1-192 54 bp Feature: gene Location: 19783-20316 bp Feature: domain Description: DUF4326 Location: 19798-20053 bp Feature: domain Description: DUF432 6 Location: 19798-2 0053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), DUF4326 (pfam14216)

Seq: WKLN01000082.1 Parabacteroides goldsteinii strain BIOML-A6 scaffold82_size6735, whole genome shotgun sequence (6735 bp)
Overview 1 RT 1: 2-2110 bp Neighborhood of RT #1 [2, 2133] RVT-GII Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 2-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-575 bp Feature: gene Location: 580-720 bp Feature: gene Location: 1117-2133 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1147-1396 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1147-13 96 bp Feature: domain Description: Phage_int_SAM_5 Location: 1444-1753 bp Feature: domain Description: Phage_int_SAM_5 Location: 1444-1753 bp Feature: domain Description: INTN1_C_like Location: 1804-2110 bp Feature: domain Description: INTN1_C_like Location: 1804-2110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII