myRT

myRT report for GCA_009677065.1_ASM967706v1

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Seq: WKMX01000010.1 Parabacteroides distasonis strain BIOML-A10 scaffold10_size181726, whole genome shotgun sequence (181726 bp)
Overview 1 RT 1: 83981-91398 bp Neighborhood of RT #1 [83981, 91398] Prophage_tail ChtBD3 KOG3544 Peptidase_S74 RVT-DGRs Feature: gene Location: 83981-87454 bp Feature: domain Description: Prophage_tail Location: 84251-85415 bp Feature: domain Description: Prophage_tail Location: 84251 -8541 5 bp Feature: domain Description: ChtBD3 Location: 86234-86348 bp Feature: domain Description: ChtBD3 Location: 86234-86348 bp Feature: domain Description: KOG3544 Location: 86366-86480 bp Feature: domain Description: KOG3544 Location: 86366-86480 bp Feature: domain Description: Peptidase_S74 Location: 87149-87302 bp Feature: domain Description: Peptidase_S74 Location: 871 49-87302 bp Feature: gene Location: 87466-87861 bp Feature: gene Location: 87918-89432 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 88125-88872 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 881 25-88872 bp Feature: gene Location: 89483-89746 bp Feature: gene Location: 89926-91398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prophage_tail (pfam06605), ChtBD3 (smart00495), KOG3544 (KOG3544, Collagens (type IV and type XIII), and related proteins ), Peptidase_S74 (pfam13884), RVT-DGRs

Seq: WKMX01000005.1 Parabacteroides distasonis strain BIOML-A10 scaffold5_size333600, whole genome shotgun sequence (333600 bp)
Overview 1 RT 1: 212218-216796 bp Neighborhood of RT #1 [212218, 217002] COG3943 RVT-Retrons HTH_17 DUF3987 Feature: gene Location: 212218-212580 bp Feature: domain Description: COG3943 Location: 212257-212512 bp Feature: domain Description: COG3943 Location: 2 12 2 57-2 12 512 bp Feature: gene Location: 212763-213650 bp Feature: gene Location: 213697-214548 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 213862-214384 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 13862 -2 14384 bp Feature: gene Location: 215249-215614 bp Feature: domain Description: HTH_17 Location: 215384-215522 bp Feature: domain Description: HTH_17 Location: 2 15384-2 1552 2 bp Feature: gene Location: 215626-217002 bp Feature: domain Description: DUF3987 Location: 215776-216796 bp Feature: domain Description: DUF3987 Location: 2 15776-2 16796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-Retrons, HTH_17 (pfam12728), DUF3987 (pfam13148)

Seq: WKMX01000008.1 Parabacteroides distasonis strain BIOML-A10 scaffold8_size366986, whole genome shotgun sequence (367269 bp)
Overview 1 RT 1: 276674-282445 bp Neighborhood of RT #1 [276674, 283542] Arginase Orn_aminotrans RVT-GII GIIM Cadherin-like Feature: gene Location: 276674-277570 bp Feature: domain Description: Arginase Location: 276683-277550 bp Feature: domain Description: Arginase Location: 276683 -277550 bp Feature: gene Location: 277574-278782 bp Feature: domain Description: Orn_aminotrans Location: 277586-278768 bp Feature: domain Description: Orn_aminotrans Location: 277586-278768 bp Feature: gene Location: 278995-280401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279337-279955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2793 3 7-279955 bp Feature: domain Description: GIIM Note: maturase Location: 280012-280231 bp Feature: domain Description: GIIM Note: maturase Location: 280012-28023 1 bp Feature: gene Location: 280433-280579 bp Feature: gene Location: 280900-283542 bp Feature: domain Description: Cadherin-like Location: 282277-282445 bp Feature: domain Description: Cadherin-like Location: 282277-282445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arginase (pfam00491), Orn_aminotrans (TIGR01885), RVT-GII, GIIM (pfam08388), Cadherin-like (pfam12733)