myRT

myRT report for GCA_009677135.1_ASM967713v1

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Seq: WKLJ01000100.1 Parabacteroides goldsteinii strain BIOML-A11 scaffold100_size2419, whole genome shotgun sequence (2419 bp)
Overview 1 RT 1: 99-1380 bp Neighborhood of RT #1 [99, 1781] RVT_N RVT-GII GIIM Feature: gene Location: 99-1781 bp Feature: RT Description: RVT_N Location: 153-396 bp Feature: RT Description: RVT_N Location: 1 53-396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441-1095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 -1 095 bp Feature: domain Description: GIIM Note: maturase Location: 1149-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 49-1 380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKLJ01000054.1 Parabacteroides goldsteinii strain BIOML-A11 scaffold54_size42017, whole genome shotgun sequence (42017 bp)
Overview 1 RT 1: 21702-25803 bp Neighborhood of RT #1 [21702, 25803] DUF4326 TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 21702-22235 bp Feature: domain Description: DUF4326 Location: 21717-21972 bp Feature: domain Description: DUF432 6 Location: 2 1717-2 1972 bp Feature: gene Location: 22453-23679 bp Feature: domain Description: TraG-D_C Location: 23035-23368 bp Feature: domain Description: TraG-D_C Location: 2 3035-2 3368 bp Feature: gene Location: 23684-25336 bp Feature: RT Description: RVT_N Location: 23738-23981 bp Feature: RT Description: RVT_N Location: 2 3738-2 3981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24026-24674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 402 6-2 4674 bp Feature: domain Description: GIIM Note: maturase Location: 24728-24959 bp Feature: domain Description: GIIM Note: maturase Location: 2 472 8-2 4959 bp Feature: gene Location: 25502-25636 bp Feature: gene Location: 25654-25803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4326 (pfam14216), TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKLJ01000079.1 Parabacteroides goldsteinii strain BIOML-A11 scaffold79_size6735, whole genome shotgun sequence (6735 bp)
Overview 1 RT 1: 2-2110 bp Neighborhood of RT #1 [2, 2133] RVT-GII Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 2-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-575 bp Feature: gene Location: 580-720 bp Feature: gene Location: 1117-2133 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1147-1396 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1147-13 96 bp Feature: domain Description: Phage_int_SAM_5 Location: 1444-1753 bp Feature: domain Description: Phage_int_SAM_5 Location: 1444-1753 bp Feature: domain Description: INTN1_C_like Location: 1804-2110 bp Feature: domain Description: INTN1_C_like Location: 1804-2110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII