myRT

myRT report for GCA_009677335.1_ASM967733v1

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Seq: WKMT01000018.1 Parabacteroides distasonis strain BIOML-A15 scaffold18_size118914, whole genome shotgun sequence (118914 bp)
Overview 1 RT 1: 104178-107827 bp Neighborhood of RT #1 [104178, 107827] RVT-DGRs Feature: gene Location: 104178-104558 bp Feature: gene Location: 104555-104983 bp Feature: gene Location: 104946-106133 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 105279-105906 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 05279-1 05906 bp Feature: gene Location: 106255-106392 bp Feature: gene Location: 106466-107827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMT01000002.1 Parabacteroides distasonis strain BIOML-A15 scaffold2_size397642, whole genome shotgun sequence (397642 bp)
Overview 1 RT 1: 202903-209294 bp 2 RT 2: 313011-318056 bp Neighborhood of RT #1 [202903, 209294] terB_like terB_like RVT-DGRs Neighborhood of RT #2 [313011, 318121] Hypoth_Ymh RVT-AbiP2 COG1373 DDE_Tnp_1 Feature: gene Location: 202903-207009 bp Feature: domain Description: terB_like Location: 205234-205366 bp Feature: domain Description: terB_like Location: 2 052 34-2 05366 bp Feature: domain Description: terB_like Location: 205435-205726 bp Feature: domain Description: terB_like Location: 2 05435-2 0572 6 bp Feature: gene Location: 207196-207609 bp Feature: gene Location: 207593-208618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 207803-208409 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 07803-2 08409 bp Feature: gene Location: 208637-208897 bp Feature: gene Location: 208926-209294 bp Feature: gene Location: 313011-313277 bp Feature: gene Location: 313350-314144 bp Feature: domain Description: Hypoth_Ymh Location: 313767-314121 bp Feature: domain Description: Hypoth_Ymh Location: 313767-31412 1 bp Feature: gene Location: 314169-315692 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 314598-315054 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 314598-315054 bp Feature: gene Location: 315751-317010 bp Feature: domain Description: COG1373 Location: 315757-316990 bp Feature: domain Description: COG1373 Location: 315757-316990 bp Feature: gene Location: 317141-318121 bp Feature: domain Description: DDE_Tnp_1 Location: 317537-318056 bp Feature: domain Description: DDE_Tnp_1 Location: 317537-318056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT terB_like (cl11965), RVT-DGRs, Hypoth_Ymh (pfam09509), RVT-AbiP2, COG1373 (Predicted ATPase, AAA+ superfamily ), DDE_Tnp_1 (pfam01609)

Seq: WKMT01000031.1 Parabacteroides distasonis strain BIOML-A15 scaffold31_size40362, whole genome shotgun sequence (40362 bp)
Overview 1 RT 1: 7129-20634 bp Neighborhood of RT #1 [7129, 20634] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 7129-7371 bp Feature: gene Location: 7551-8036 bp Feature: gene Location: 8033-9337 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8246-8840 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8246-8840 bp Feature: gene Location: 9854-16591 bp Feature: domain Description: Laminin_G_3 Location: 11315-11393 bp Feature: domain Description: Laminin_G_3 Location: 113 15-113 93 bp Feature: domain Description: Laminin_G_3 Location: 12044-12470 bp Feature: domain Description: Laminin_G_3 Location: 12044-12470 bp Feature: gene Location: 16618-20634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: WKMT01000036.1 Parabacteroides distasonis strain BIOML-A15 scaffold36_size16329, whole genome shotgun sequence (16329 bp)
Overview 1 RT 1: 13572-16045 bp Neighborhood of RT #1 [13572, 16045] RVT-DGRs Feature: gene Location: 13572-13880 bp Feature: gene Location: 13902-14159 bp Feature: gene Location: 14235-15563 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14475-15072 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14 4 75-15072 bp Feature: gene Location: 15560-16045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMT01000069.1 Parabacteroides distasonis strain BIOML-A15 scaffold69_size3811, whole genome shotgun sequence (3811 bp)
Overview 1 RT 1: 1096-3809 bp Neighborhood of RT #1 [1096, 3809] RVT-UG27 Feature: gene Location: 1096-1374 bp Feature: gene Location: 1404-1670 bp Feature: gene Location: 1720-2982 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1912-2548 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1912-25 48 bp Feature: gene Location: 2975-3643 bp Feature: gene Location: 3657-3809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WKMT01000072.1 Parabacteroides distasonis strain BIOML-A15 scaffold72_size3361, whole genome shotgun sequence (3361 bp)
Overview 1 RT 1: 2-3358 bp Neighborhood of RT #1 [2, 3358] RVT-DGRs RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-850 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 260-803 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26 0-803 bp Feature: gene Location: 855-1016 bp Feature: gene Location: 1336-3171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1630-2452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 30-2452 bp Feature: domain Description: Intron_maturas2 Location: 2611-2980 bp Feature: domain Description: Intron_maturas2 Location: 26 11-2980 bp Feature: domain Description: HNHc Note: nucleases Location: 3004-3145 bp Feature: domain Description: HNHc Note: nucleases Location: 3004-3145 bp Feature: gene Location: 3164-3358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)