myRT

myRT report for GCA_009677345.1_ASM967734v1

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Seq: WKMN01000193.1 Parabacteroides distasonis strain BIOML-A21 scaffold193_size2695, whole genome shotgun sequence (2695 bp)
Overview 1 RT 1: 1242-2259 bp Neighborhood of RT #1 [1242, 2693] RVT-UG27 Feature: gene Location: 1242-1520 bp Feature: gene Location: 1550-1816 bp Feature: gene Location: 1866-2693 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1869-2259 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 869-2259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WKMN01000209.1 Parabacteroides distasonis strain BIOML-A21 scaffold209_size2301, whole genome shotgun sequence (2301 bp)
Overview 1 RT 1: 906-2292 bp Neighborhood of RT #1 [906, 2300] RVT-DGRs Feature: gene Location: 906-1139 bp Feature: gene Location: 1161-1418 bp Feature: gene Location: 1494-2300 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1734-2292 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1734-2 2 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMN01000227.1 Parabacteroides distasonis strain BIOML-A21 scaffold227_size2025, whole genome shotgun sequence (2025 bp)
Overview 1 RT 1: 21-1532 bp Neighborhood of RT #1 [21, 2023] RVT-DGRs Feature: gene Location: 21-263 bp Feature: gene Location: 444-929 bp Feature: gene Location: 926-2023 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 935-1532 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93 5-153 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMN01000239.1 Parabacteroides distasonis strain BIOML-A21 scaffold239_size1807, whole genome shotgun sequence (1807 bp)
Overview 1 RT 1: 3-1805 bp Neighborhood of RT #1 [3, 1805] RVT-DGRs Feature: gene Location: 3-1115 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 216-810 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 216-810 bp Feature: gene Location: 1632-1805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMN01000002.1 Parabacteroides distasonis strain BIOML-A21 scaffold2_size135211, whole genome shotgun sequence (135211 bp)
Overview 1 RT 1: 12634-18581 bp 2 RT 2: 122296-127341 bp Neighborhood of RT #1 [12634, 18581] RVT-DGRs Neighborhood of RT #2 [122296, 127406] Hypoth_Ymh RVT-AbiP2 COG1373 DDE_Tnp_1 Feature: gene Location: 12634-16296 bp Feature: gene Location: 16483-16896 bp Feature: gene Location: 16880-17905 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17090-17696 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17090-17696 bp Feature: gene Location: 17924-18184 bp Feature: gene Location: 18213-18581 bp Feature: gene Location: 122296-122562 bp Feature: gene Location: 122635-123429 bp Feature: domain Description: Hypoth_Ymh Location: 123052-123406 bp Feature: domain Description: Hypoth_Ymh Location: 12305 2-123406 bp Feature: gene Location: 123454-124977 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 123883-124339 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 123883-124339 bp Feature: gene Location: 125036-126295 bp Feature: domain Description: COG1373 Location: 125042-126275 bp Feature: domain Description: COG1373 Location: 125 042-126275 bp Feature: gene Location: 126426-127406 bp Feature: domain Description: DDE_Tnp_1 Location: 126822-127341 bp Feature: domain Description: DDE_Tnp_1 Location: 126822-127341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Hypoth_Ymh (pfam09509), RVT-AbiP2, COG1373 (Predicted ATPase, AAA+ superfamily ), DDE_Tnp_1 (pfam01609)

Seq: WKMN01000322.1 Parabacteroides distasonis strain BIOML-A21 scaffold322_size1168, whole genome shotgun sequence (1168 bp)
Overview 1 RT 1: 3-1072 bp Neighborhood of RT #1 [3, 1077] RVT-GII GIIM DUF4134 Feature: gene Location: 3-830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 -174 bp Feature: domain Description: GIIM Note: maturase Location: 231-462 bp Feature: domain Description: GIIM Note: maturase Location: 231-46 2 bp Feature: gene Location: 835-1077 bp Feature: domain Description: DUF4134 Location: 982-1072 bp Feature: domain Description: DUF4134 Location: 982-1072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4134 (pfam13572)

Seq: WKMN01000039.1 Parabacteroides distasonis strain BIOML-A21 scaffold39_size45890, whole genome shotgun sequence (45890 bp)
Overview 1 RT 1: 1758-5707 bp Neighborhood of RT #1 [1758, 5707] RVT-DGRs Feature: gene Location: 1758-2048 bp Feature: gene Location: 2058-3419 bp Feature: gene Location: 3752-4939 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4085-4712 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4085-47 12 bp Feature: gene Location: 4902-5330 bp Feature: gene Location: 5327-5707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMN01000004.1 Parabacteroides distasonis strain BIOML-A21 scaffold4_size118046, whole genome shotgun sequence (118046 bp)
Overview 1 RT 1: 82759-86850 bp Neighborhood of RT #1 [82759, 86879] DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Feature: gene Location: 82759-82986 bp Feature: domain Description: DUF4141 Location: 82771-82927 bp Feature: domain Description: DUF4141 Location: 8 2771-8 2927 bp Feature: gene Location: 83026-83187 bp Feature: gene Location: 83507-85342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83801-84623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 38 01-8 4623 bp Feature: domain Description: Intron_maturas2 Location: 84782-85151 bp Feature: domain Description: Intron_maturas2 Location: 8 478 2-8 5151 bp Feature: domain Description: HNHc Note: nucleases Location: 85175-85316 bp Feature: domain Description: HNHc Note: nucleases Location: 8 5175-8 5316 bp Feature: gene Location: 85335-85871 bp Feature: gene Location: 85875-86879 bp Feature: domain Description: Bac_Flav_CT_J Location: 85884-86850 bp Feature: domain Description: Bac_Flav_CT_J Location: 8 58 8 4-8 68 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)