myRT

myRT report for GCA_009677405.1_ASM967740v1

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Seq: WKMU01000141.1 Parabacteroides distasonis strain BIOML-A14 scaffold141_size1273, whole genome shotgun sequence (1273 bp)
Overview 1 RT 1: 108-1242 bp Neighborhood of RT #1 [108, 1271] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 108-1271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111-546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 -546 bp Feature: domain Description: Intron_maturas2 Location: 621-936 bp Feature: domain Description: Intron_maturas2 Location: 621 -936 bp Feature: domain Description: HNHc Note: nucleases Location: 1092-1242 bp Feature: domain Description: HNHc Note: nucleases Location: 1 092-1 242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WKMU01000001.1 Parabacteroides distasonis strain BIOML-A14 scaffold1_size589995, whole genome shotgun sequence (589995 bp)
Overview 1 RT 1: 312920-319311 bp 2 RT 2: 423026-428071 bp Neighborhood of RT #1 [312920, 319311] terB_like terB_like RVT-DGRs Neighborhood of RT #2 [423026, 428136] Hypoth_Ymh RVT-AbiP2 COG1373 DDE_Tnp_1 Feature: gene Location: 312920-317026 bp Feature: domain Description: terB_like Location: 315251-315383 bp Feature: domain Description: terB_like Location: 3152 51-315383 bp Feature: domain Description: terB_like Location: 315452-315743 bp Feature: domain Description: terB_like Location: 315452 -315743 bp Feature: gene Location: 317213-317626 bp Feature: gene Location: 317610-318635 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 317820-318426 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31782 0-31842 6 bp Feature: gene Location: 318654-318914 bp Feature: gene Location: 318943-319311 bp Feature: gene Location: 423026-423292 bp Feature: gene Location: 423365-424159 bp Feature: domain Description: Hypoth_Ymh Location: 423782-424136 bp Feature: domain Description: Hypoth_Ymh Location: 42 3782 -42 4136 bp Feature: gene Location: 424184-425707 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 424613-425069 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 42 4613-42 5069 bp Feature: gene Location: 425766-427025 bp Feature: domain Description: COG1373 Location: 425772-427005 bp Feature: domain Description: COG1373 Location: 42 5772 -42 7005 bp Feature: gene Location: 427156-428136 bp Feature: domain Description: DDE_Tnp_1 Location: 427552-428071 bp Feature: domain Description: DDE_Tnp_1 Location: 42 7552 -42 8071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT terB_like (cl11965), RVT-DGRs, Hypoth_Ymh (pfam09509), RVT-AbiP2, COG1373 (Predicted ATPase, AAA+ superfamily ), DDE_Tnp_1 (pfam01609)

Seq: WKMU01000028.1 Parabacteroides distasonis strain BIOML-A14 scaffold28_size34867, whole genome shotgun sequence (34867 bp)
Overview 1 RT 1: 23772-33234 bp Neighborhood of RT #1 [23772, 33234] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 23772-30509 bp Feature: domain Description: Laminin_G_3 Location: 25233-25311 bp Feature: domain Description: Laminin_G_3 Location: 2523 3 -253 11 bp Feature: domain Description: Laminin_G_3 Location: 25962-26388 bp Feature: domain Description: Laminin_G_3 Location: 25962-263 88 bp Feature: gene Location: 30754-30909 bp Feature: gene Location: 31026-32330 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31239-31833 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 123 9-3 183 3 bp Feature: gene Location: 32327-32812 bp Feature: gene Location: 32992-33234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WKMU01000029.1 Parabacteroides distasonis strain BIOML-A14 scaffold29_size33407, whole genome shotgun sequence (33407 bp)
Overview 1 RT 1: 18306-21202 bp Neighborhood of RT #1 [18306, 21202] RVT-DGRs Feature: gene Location: 18306-18614 bp Feature: gene Location: 18636-18893 bp Feature: gene Location: 18969-20297 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19209-19806 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19209-19806 bp Feature: gene Location: 20294-20779 bp Feature: gene Location: 20960-21202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMU01000035.1 Parabacteroides distasonis strain BIOML-A14 scaffold35_size17959, whole genome shotgun sequence (17959 bp)
Overview 1 RT 1: 10377-14310 bp Neighborhood of RT #1 [10377, 14310] RVT-UG27 Feature: gene Location: 10377-11024 bp Feature: gene Location: 11038-11706 bp Feature: gene Location: 11699-12961 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 11891-12527 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 11891-125 27 bp Feature: gene Location: 13284-13781 bp Feature: gene Location: 13831-14310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WKMU01000044.1 Parabacteroides distasonis strain BIOML-A14 scaffold44_size9607, whole genome shotgun sequence (9607 bp)
Overview 1 RT 1: 5359-9451 bp Neighborhood of RT #1 [5359, 9480] DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Feature: gene Location: 5359-5586 bp Feature: domain Description: DUF4141 Location: 5371-5527 bp Feature: domain Description: DUF4141 Location: 5371-5527 bp Feature: gene Location: 5626-5787 bp Feature: gene Location: 6107-7942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6401-7223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 401-7223 bp Feature: domain Description: Intron_maturas2 Location: 7382-7751 bp Feature: domain Description: Intron_maturas2 Location: 7382-7751 bp Feature: domain Description: HNHc Note: nucleases Location: 7775-7916 bp Feature: domain Description: HNHc Note: nucleases Location: 7775-7916 bp Feature: gene Location: 7935-8471 bp Feature: gene Location: 8476-9480 bp Feature: domain Description: Bac_Flav_CT_J Location: 8482-9451 bp Feature: domain Description: Bac_Flav_CT_J Location: 8482-9451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)

Seq: WKMU01000009.1 Parabacteroides distasonis strain BIOML-A14 scaffold9_size227901, whole genome shotgun sequence (227901 bp)
Overview 1 RT 1: 104179-107828 bp Neighborhood of RT #1 [104179, 107828] RVT-DGRs Feature: gene Location: 104179-104559 bp Feature: gene Location: 104556-104984 bp Feature: gene Location: 104947-106134 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 105280-105907 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 105280-105907 bp Feature: gene Location: 106256-106393 bp Feature: gene Location: 106467-107828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs